Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g4137 ATGGGAGGCAAATGTCCACACAGAAAGGTGAAGAAGAGAAGATTATCTAACAAACAAGATCGCCGTTCTAGATTCCTCATCAAAGGTGATGATATGGTTTATGATCAAGTAAATAAGCCTGAAGAAGAGAGAAAACCTTTACCTGTTGATGAAGATTTGCCTGGAATGGGACAGCACTATTGTCTTCACTGCGACCGATTCTTTGCCAGTGTAGCTGTTAGGGACGAGCATTTTAAGACAAAAAAACACAGGAGACGTGTGAAACTAATGATGGGTGATGCACCACACACTCAACTGGATGCTGAATTAGCTGCAGGGATGGGAATGCCAGATAATGGACCAAAGTTAATGTCTATGTAA 360 0.4167 MGGKCPHRKVKKRRLSNKQDRRSRFLIKGDDMVYDQVNKPEEERKPLPVDEDLPGMGQHYCLHCDRFFASVAVRDEHFKTKKHRRRVKLMMGDAPHTQLDAELAAGMGMPDNGPKLMSM* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g4137 119 ProSitePatterns Zinc finger C2H2 type domain signature. 61 83 IPR013087 -
Tpr1g4137 119 MobiDBLite consensus disorder prediction 1 19 - -
Tpr1g4137 119 Pfam Zinc-finger double-stranded RNA-binding 58 84 IPR022755 -
Tpr1g4137 119 Gene3D Classic Zinc Finger 46 109 - -
Tpr1g4137 119 SMART ZnF_U1_5 56 90 IPR003604 GO:0003676|GO:0008270
Tpr1g4137 119 SUPERFAMILY beta-beta-alpha zinc fingers 46 110 IPR036236 -
Tpr1g4137 119 MobiDBLite consensus disorder prediction 1 23 - -
Tpr1g4137 119 PANTHER EXPRESSED PROTEIN 1 119 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g4137 3 118 C2H2 Transcription Factor Family AT2G36930 72.414 3.31e-61 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g4137 K14821 - qsu:112025713 217.238
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g4137 1 47665668 47667999 Tpr1g4137 1 47665668 47667999 ECH