Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr1g4129 | ATGGCAATGAATGCAGTGTTTAGGGCTACTAGACCCACCAGTTCTGGTGTAGTGAGTACCGTGTATCAAGTCGCTACGTATCTTAGAGTTAAGAACTATCGTATGCTTAGTTCTTTTATTGGGAAGGTACAGAAGAGTTTATCACTCTTTGTACCAAAAAAGCATACATTGAGCTACTTGAATGAAGATCATGCCACAGCCACAGACACAGCCACAACTGAGCTTGCAGATGATGTTATGAAAGGTTGCTTTGCTGTTATGGCAAAGAAGGGTGAGGAAACTAGAAGGTTTATTGTTGGGTTAGATTACTTAACTGATCCTACTTTTTTAGGATTGCTTGATGAAGCTGTGGAGGAATATGGTTTTAGACAAAAAGGAACTCTCGTTGTTCCGTGTCGCCCGATAGAATTACAGAACATTTTAGATGGTCGGAAAACCTAG | 441 | 0.4059 | MAMNAVFRATRPTSSGVVSTVYQVATYLRVKNYRMLSSFIGKVQKSLSLFVPKKHTLSYLNEDHATATDTATTELADDVMKGCFAVMAKKGEETRRFIVGLDYLTDPTFLGLLDEAVEEYGFRQKGTLVVPCRPIELQNILDGRKT* | 147 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr1g4129 | 146 | Pfam | Auxin responsive protein | 68 | 141 | IPR003676 | GO:0009733 | |
Tpr1g4129 | 146 | PANTHER | SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN | 35 | 145 | - | - | |
Tpr1g4129 | 146 | PANTHER | AUXIN-INDUCED PROTEIN-LIKE-RELATED | 35 | 145 | IPR003676 | GO:0009733 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr1g4129 | Tpr-Chr1 | 47584104 | 47584659 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr1g4129 | 54 | 133 | Calmodulin-binding Proteins | AT5G20810 | 41.250 | 2.59e-10 | 54.3 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr1g4129 | - | K14488 | gmx:106795483 | 136.346 |