Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g4128 ATGCTTAGTTCTTTTGTTGGAAAAGTACAAAAAAGTTTATCAGTGTTGGTACCAAGAAAGCATGCATTGAGCTACTTTAATGAAGATTATTCCACAACTGAGGTTGTAGCCGATGATGTTATGAAAGGTTACTTTGCTGTTCTTGCAAGGAAGGGTGAGGAAACTAGAAGGTTTATTATTGGGTTAGATTACTTAACTGATCCTGCTTTTGTGGGATTACTTGATGAAGCTTGGAAGGAATATGGTTTTGGACAAAAAGGAACTCTTGTTGTTCCATGTCGGCCGATAGAATTACAAAACATTTTAGATGGTCGGAAAACTTAA 324 0.3642 MLSSFVGKVQKSLSVLVPRKHALSYFNEDYSTTEVVADDVMKGYFAVLARKGEETRRFIIGLDYLTDPAFVGLLDEAWKEYGFGQKGTLVVPCRPIELQNILDGRKT* 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g4128 107 Pfam Auxin responsive protein 32 102 IPR003676 GO:0009733
Tpr1g4128 107 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 1 106 - -
Tpr1g4128 107 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 106 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g4128 Tpr-Chr1 47566996 47567319 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g4128 39 94 Calmodulin-binding Proteins AT3G43120 48.214 8.28e-11 53.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g4128 1 47566996 47567319 Tpr1g4128 1 47566996 47567319 ECH