Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g4126 ATGCTGAAATCTTTGGTTAGGAAAATACAAAAGGGACTCTCACTAATTGTGCCCAAAAACTACTTCAATGAAGATGTTAGGGAAGGATATTTTGTTGTGGTTGCAATGAAAGATGGAGAAACCAAAAGGTTTATGATTGGATTAGAGTACTTGAATGATCCTGTATTTTTGAGATTACTTGATCAAGCTAGGGAAGAGTATGGTTTTAGACAGCAGGGAACTCTTGCAGTCCCTTGTGGGCCTCAAGAATTGCAGAACATTCTACATAGTTCTAGAGGGTAG 282 0.383 MLKSLVRKIQKGLSLIVPKNYFNEDVREGYFVVVAMKDGETKRFMIGLEYLNDPVFLRLLDQAREEYGFRQQGTLAVPCGPQELQNILHSSRG* 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g4126 93 PANTHER SMALL AUXIN-UP RNA-RELATED 1 92 - -
Tpr1g4126 93 Pfam Auxin responsive protein 21 88 IPR003676 GO:0009733
Tpr1g4126 93 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 92 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g4126 Tpr-Chr1 47547534 47547815 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g4126 2 88 Calmodulin-binding Proteins AT4G34750 34.091 9.70e-12 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g4126 - K14488 mtr:MTR_1g063330 122.864