Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g4120 ATGTCAACTACATTAGAATATTCTCAACTAGTTTTTAATCACGATGGTATTAGAAACCTCAAAGTTAATGAGGTGAAGGCTGAGAATTTCATGTCTGTTCCAACTAATAATCCGTATGATGGAGGAGTTAGCAAAACTGTGTCAAACACTCATGCATTCAAGGAAGGCGATCATTCAATACCAACAAGTCTTACATACAGCAAAGGGGATGCCAATGTAATATTGATGGATGGCGCTTTTGACAGGACAGATAACAATTTAATGTCGATGAGTCAATCTTATAATAAGGGAGATGACAACTTTTCAATAGCTTCAACATACAATGATATTTGTAATTCAATATCAATGGATCAAGGATACAATCACGTAGATAGTAATGTCATGTCTATTGCTCAACCTAACAACAAGGCTCATGGTAATTCTATGTTAAGTAACCACTTATTCAATAAGGTTGAAGATGGCACCATATCAATGGGCCACATTTACCATCATAGTGGAAATGACATGCCGTTTTTTGCTCATTCTCATAATAAAGGTGGAAGCACTATCATATCATTTGGTGACTGTGACAATGACGATGTAACTCCATCTGACTTATTTGTTTCCGACTACGGACTGTTTATGGGTCAAGCACCTTTGTGTATGTCGCATATGTCACAAGTTGCGAATGAAAAAGAGTTCGTTAGATCAAGCACTAAAAAACTACTTCCAAGTACAGCTCAGACATCTGCATCTGAAACTGAAAATGTTACCAAGACAAAAGAGGAGATGGAAATGTGTAAAAAGGCTACTTCAAATAACTTCCCTTCAAATGTTAGAAGTTTGCTATCCACTGGTATGCTGGATGGCGTCTCTGTAAAGTATAAGGCATGGTCACGGGAGAAGGAACTTCGAGCTGTTATAAAAGGTGCTGGGTATTTGTGCAGCTGTCCATCGTGTAGTTTTTCTAAGGTTATTAACGCATTCGAGTTTGAACGGCATGTTGGTTGCAAGACAAAGCACCCAAATAATCATATTTACTTTGAGAATGGGAAAACCATATATGGAGTGATACAAGAGCTCAGGAGCACTCCACAGAATATGTTATTTGAAGTTATTCAAATTTCAAACAATAACTGGTTCACCTATCAATCAGAAAGCCTTCCGCATCTGGAAAGCACGCGAGCTCCAGCGCATATGTGGAAAAGATGA 1191 0.3804 MSTTLEYSQLVFNHDGIRNLKVNEVKAENFMSVPTNNPYDGGVSKTVSNTHAFKEGDHSIPTSLTYSKGDANVILMDGAFDRTDNNLMSMSQSYNKGDDNFSIASTYNDICNSISMDQGYNHVDSNVMSIAQPNNKAHGNSMLSNHLFNKVEDGTISMGHIYHHSGNDMPFFAHSHNKGGSTIISFGDCDNDDVTPSDLFVSDYGLFMGQAPLCMSHMSQVANEKEFVRSSTKKLLPSTAQTSASETENVTKTKEEMEMCKKATSNNFPSNVRSLLSTGMLDGVSVKYKAWSREKELRAVIKGAGYLCSCPSCSFSKVINAFEFERHVGCKTKHPNNHIYFENGKTIYGVIQELRSTPQNMLFEVIQISNNNWFTYQSESLPHLESTRAPAHMWKR* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g4120 396 PANTHER PROTEIN, PUTATIVE-RELATED 1 368 - -
Tpr1g4120 396 Pfam Tify domain binding domain 300 354 IPR032308 -
Tpr1g4120 396 PANTHER AUTOIMMUNE REGULATOR 1 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g4120 Tpr-Chr1 47323903 47327894 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g4120 249 367 PHD Transcription Factor Family AT3G53680 56.303 4.60e-38 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g4120 - - mtr:MTR_1g067750 589.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g4120 1 47323903 47327894 Tpr1g4120 1 47323903 47327894 ECH