Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g4119 ATGTATCTCTTCTCAACAAAGAGGCTAATTCTCTTGTTTATCGTGTTGGATCAAATGGATCCTGATATTGATCGCCAAATATCAGAGCACGTCCTTCGTATGCATCGATTTTGTTCTGCTATTGATGGAGGTGAGGCAGCACATGATGGGAGTGCACGATATGGAAGAGAAGAGGAAGCTGATACTGAATCATCTGTCTTTGTCAAATATAACAGAACGCTACATGGAAAGAAAACTGATAGAGGTCGCAAACGCGATACACTTACAATTAAGTTTCTTAAAAAGTATATCCATTATGCTAAGCATAGGATTCAACCTGACCTGACTGATGAGGCATCTGACCAGATTGCCACAGCATATACTGAGCTCAGAAATGCAAATTCAAATGCAAAGACCGGAGGAACACTTCCAATAACTGCCAGAACTTTAGAAACCATAATACGTCTCTCAACTGCTCATGCCAAATTGAAGTTGAGCAGAAAGATATTAGCTTCAGATAAGCTCTGA 507 0.4004 MYLFSTKRLILLFIVLDQMDPDIDRQISEHVLRMHRFCSAIDGGEAAHDGSARYGREEEADTESSVFVKYNRTLHGKKTDRGRKRDTLTIKFLKKYIHYAKHRIQPDLTDEASDQIATAYTELRNANSNAKTGGTLPITARTLETIIRLSTAHAKLKLSRKILASDKL* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g4119 168 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 166 IPR027417 -
Tpr1g4119 168 PANTHER DNA HELICASE 8 166 - -
Tpr1g4119 168 Pfam MCM AAA-lid domain 92 166 IPR041562 -
Tpr1g4119 168 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 8 166 IPR031327 GO:0003677|GO:0005524|GO:0032508
Tpr1g4119 168 Gene3D - 5 167 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g4119 Tpr-Chr1 47314381 47338067 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g4119 8 112 Core DNA Replication Machinery Family AT5G46280 68.868 7.28e-37 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g4119 K02541 - rcu:8264134 272.322