Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g4097 ATGAGCAATTCAGTTTTTCAAATTCATGCTTGCATTTGCAAGATTCTACTCAAGTTGAAGCTTTTGAGCAATTGGAAACTAAGTTTACGTGAAAGTAAGAAGGAGAATTTTGGCTCCGGCATCTCTTCCAGAAAGGAAGAAGCAGGTCAGATTTTTGTTTCTGCTCCTATTATCAAAAGAACTGATCTGTTTTCCCTTGAGACTGCGGATGGTATATATGTTTACACTAGGGGTTTCATGAACAAGCAGCGTACACTGGAAAATGGTTTTACTCCTCAGATTTCAAAGAGTTTTTTATATGGTTTTCCTCCAAATTGGGAAAGCTATGCTCTAGAATGCATCAAAGAAGAATTTGAAGCTGGTATTGATTTGGCTAATGCTGTTCCAGAGAATGTATCTACAATTTGTCACGAAATCTTGTATGATGGTGAGGAAAATTCCATTCCTACTCCGTTGGTGTTTCCTGAAGAAGCCCCAGGAGAATGCAATAAACCATCCGCTGTAGACAAATGCAAAGTCTCAAAGGAGATGAGTGGGGTTGATGTTGCTTATGGTAGTGACGAAAATAGACGTTGTACCAGCTTGTATAATAGTAAAGTTTGTCAGCAGCAGCCTGCGTCTGGAGGTCCTCTCAAGCATCCAGATACAGAGCAGAGCTCTACCTCGATGGAAGTGGAAAATCGTAATCCGGATACTGCTATTTCTAATAATGTATCCGCAAATCTTCCAGAAATATCACCTGGTGCTGTGGAAAAATCTTTTCCTACTTCTTTTGTATCATCGGAGAAGGCCACAGGAGATTATAAGTCAATTAAAATGAGTGAGGTCAATGTTGTTCATGGTAGTGGTGGGAATAGACGTAGTGTCCGGTTGCATAATATTAAACTCAGCCAGAAGAAGCAACCTGCTACTGAAGGTCCTCCAAAGTATCCAATTGAACGCCATATCTCTGCCTCAACAGCTTTTGAGATAAGTGGTGGAGGACAGGAAAGTCCATCGAAACCCGTTCAATCAAAATTGAAGGGACCAGTAAATGCATTGTCTGAGCAGGTCAGAAATAAATTCACATCCAGAGTATGCAAAACTACGCCAGCAAAAACTGACCGATGA 1110 0.4072 MSNSVFQIHACICKILLKLKLLSNWKLSLRESKKENFGSGISSRKEEAGQIFVSAPIIKRTDLFSLETADGIYVYTRGFMNKQRTLENGFTPQISKSFLYGFPPNWESYALECIKEEFEAGIDLANAVPENVSTICHEILYDGEENSIPTPLVFPEEAPGECNKPSAVDKCKVSKEMSGVDVAYGSDENRRCTSLYNSKVCQQQPASGGPLKHPDTEQSSTSMEVENRNPDTAISNNVSANLPEISPGAVEKSFPTSFVSSEKATGDYKSIKMSEVNVVHGSGGNRRSVRLHNIKLSQKKQPATEGPPKYPIERHISASTAFEISGGGQESPSKPVQSKLKGPVNALSEQVRNKFTSRVCKTTPAKTDR* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g4097 369 PANTHER MIS18-BINDING PROTEIN 1 22 296 IPR039110 -
Tpr1g4097 369 Pfam SANTA (SANT Associated) 22 109 IPR015216 -
Tpr1g4097 369 MobiDBLite consensus disorder prediction 322 344 - -
Tpr1g4097 369 MobiDBLite consensus disorder prediction 203 227 - -
Tpr1g4097 369 PANTHER MIS18-BINDING PROTEIN 1 22 296 - -
Tpr1g4097 369 MobiDBLite consensus disorder prediction 213 227 - -
Tpr1g4097 369 MobiDBLite consensus disorder prediction 322 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g4097 Tpr-Chr1 46835957 46839040 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Tpr1g4097 SANTA 2e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g4097 - - cam:101500947 333.954