Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g4068 ATGACCACATCAGATCCTTCACTCGCAGTCGAAATTGCCGATGCTGCATCCTCCAAAAACTGCCACTCAATCGACGCTCCAATCTCTGGTGGAGACCGCGGCGCGAAAAACGGAACCCTAGCAATCTTCGCTGGAGGAGATGAATCAATCGTTAAATTACTTTCTCCATTGTTTTCATCATTGGGGAAGGTGAATTACATGGGTAGTAGCGGAAAAGGAGAAGGAGGCTTCGGAAGGGTATACAAAGGAACAATTAAAAACACAGATCAAGTTGTTGCTGTGAAGCAACTTGACAGAAATGGATTTCAAGGAAATAGAGAATTTCTTGTAGAGGTTTTGATTTTGAGTCTTTTGCATCACCCTAACCTTGTCAATTTAGTAGGGTATTGTGCTGAAGGTGATCAAAGGGTTTTGGTATATGAATATATGCCAAATGGTTCCTTAGAAGATCACTTGCTTGGCTTGATGCTACTTGCATCTCTTGGAAGCGAATGCGAGGAAACTATGTTAAAACAATTGATGTTGTTGGAGTTTGGCAAGAGAACAATGTTGTTGAAACTGAAAAGACCATTGAAGCTCTTAAAAGAGTTGCATAGTAAATTTAGAAAAGTTCCCAGAATTGATGTTATTCTTGTTGTATAA 642 0.4003 MTTSDPSLAVEIADAASSKNCHSIDAPISGGDRGAKNGTLAIFAGGDESIVKLLSPLFSSLGKVNYMGSSGKGEGGFGRVYKGTIKNTDQVVAVKQLDRNGFQGNREFLVEVLILSLLHHPNLVNLVGYCAEGDQRVLVYEYMPNGSLEDHLLGLMLLASLGSECEETMLKQLMLLEFGKRTMLLKLKRPLKLLKELHSKFRKVPRIDVILVV* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g4068 213 PANTHER OS07G0668900 PROTEIN 70 155 - -
Tpr1g4068 213 PANTHER OS07G0668900 PROTEIN 70 155 - -
Tpr1g4068 213 SUPERFAMILY Protein kinase-like (PK-like) 73 156 IPR011009 -
Tpr1g4068 213 Pfam Protein tyrosine and serine/threonine kinase 73 153 IPR001245 GO:0004672|GO:0006468
Tpr1g4068 213 Gene3D - 1 68 - -
Tpr1g4068 213 Gene3D Phosphorylase Kinase; domain 1 73 143 - -
Tpr1g4068 213 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 66 IPR036291 -
Tpr1g4068 213 ProSiteProfiles Protein kinase domain profile. 66 213 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g4068 213 Pfam NAD binding domain of 6-phosphogluconate dehydrogenase 1 66 IPR006115 GO:0050661
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g4068 Tpr-Chr1 46083163 46086173 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g4068 73 155 Glycoside Hydrolase AT3G07070 77.108 5.06e-40 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Tpr1g4068 PK_Tyr_Ser-Thr 8.3e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g4068 - - jre:108983909 154.066