Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g4064 ATGTCTAAAGAAATGAAGTCCAAGCACAATCCATCAAATGTAGTAGCCAAATTAATGGGGCTTGAAACCCTTTCAAAGGGAGAGCCTAATTTATCTGTGATTAGAAGCCAAACAAAAGATTATTCTCAAGACATGTATGCTCATTTAGGATGGCCATTGAAACATTGGAAGGTGGAAGATAAGTTTATGATGGATAATAAGGATATGCTTCTTGGAGTTCATCATCCAAGCACAGAACAGATTGGCCACAAAGATGGATATGAAACATGGCTGCAATCTCAGAGAGGATGGTGGAGAGAAGATTTTGATGAGGGGAAGATGGCTCTTGTCCGTAAAAAATTCATTGAAGCAAAGTATCTGTCGACAGATAAGACGTTGCGTCAATCCAAGCAATTTCAAGATGCATTGGATATTTTAAGCTCAAACAATGATCTCTTAGTCAGGTTTTTGGATTCACAAAAGCTTTATCAACTTCCCTCTACTCCACCGGACGATTCGAACTGCATTACCCTTATCAAACCTTTGAAGATGTTTGGAAATGACAAATCTTCCGGAAAGGGTAGGAAGAATGATAGATTGCTTAAGAAACCAGCAGATTCTGATCAGACAGCTGTATGGGAGAACATGAATCGTGGATACTCTCCGGAATCTACTCGAATAGTAGTATTGAAACCTAGTCCTGGGAGGACAAATGAACTTAAGGCTTTAGTTTCTCCAACAAATCCATCACCTCAAAGTTTCTATCGGGGAAATGCAAATGATAATGTACTTGAATCCATAAAAGTGGCTAAAGAGATTCGAATGCAAATGCAGATGCATAAAGGTCTAAGGAGCTATCAAAAGGATAAAACGTTATTACTTTCCTCAGCATTTTCCAATGGTTATTCTAGTGATGATAGCTCATATAACAAATCATATCATGATTTGGAAGCTATGTCACCAATGCCAAGGCATTCATGGGATTGTATCAATGTATGTGGAAGTCCTTATTCTACGCAATCTATGGGTCGTGCAACATGTTCTCCCGAGTCATCGGTGTGCATAGAGGCAAAGAAACGGCTTTCTGAAAGATGGAATACAGTTACAGCTAAAGAAAAACATCATCAAGAACAAAGGCGTGTAGCGAGAAACTCTACCTTAGGTGAAATGCTTTCTCTTTCCCTTGTAAAGAAATCTGTAACTTCTGTGGTTGAGAGTGCTAATAAACACCAAGAAGAACCAAGTAAATCCATTTCTTGCAGTCAATCTCTCGATGAAGAAATGAGCACTGATGATTCATCTCAAAATGTTTCTTCAGCAAATCCTGTTCCTGCATCGTCTACTGTCGATGAACCCGGCCTCTGTGTTGATGCTAGCATAGAACATGATGACTCCAAGGTGGGGGCAAAGTCAAAGAGTAAGAAATCATCATTTAAAGGGAAAGTGGCAAGTTTCTTCTTTTCAATGAGTAAAAAATCAACCAAGAAAAAATATAGTTCATCTCAATCTAAAGATGAATCTGAAACTATTGTCACCGAAACATCGGTTCCATCAGTAAATTCACCTGGAGATCATGTGTCTCAAAGCTCAAACGTTGGTGGATTTGAAGAGTCTCTTGCAGCTTTGTGTGACTCTTCATGTAAAACATCAACAGATTCATTTTCTTGTGGACAACAAGAAGACATGATTACACTAGAGCCTGGATTGACTGAATCAAAGTCTATGGTGCTAGAGATTCCAAATGAAAAACAGGATCGGCCAAGTCCAATCTCAGTATTAGAATCTCCATTTGAAGATTATAATACATCTCATGAGTCCTTGGAATGCATGAAGGGTGGTCACATGGGATCATTGGTGCGACTGAAGTCCAATTTAATTGACAAATCACCACCAATAGAATCAGTAGCTAGGACACTATCATGGGATGAAGATTCTTTTGCAGAGTTAACAAGGGCTTCTTCCTTAGACACCAAGTTAGAGGAACATGATTGGCTTCTCTTGGTCCAAAAGCTACTATCAGCGTCTGGACTAGATGATGATCAAGAACAACAACATGACTCATTTCACACAAGATTCCATTCCCTTGAAAGCCCATTGGATCCATCATTAAGGGACAATAAGGATTGTACTCAGCCACTAAATGAGGCCAAGAGAAGGAAAATGAGATCAAATCAGAAGCTTGTATTTGATTGTGTTAATGCTGCACTATTGGAAGTTGTTGGTTATGGGGGGTCAGAGAATTACTTCAAGATGTACTGTGGGACCCACAGGAAGGCCCTAGTTCAAGAGGGTTCATGTTTGATGGACCACATTGTGACCCAAATGAAGGAATTAATAGCAAATGGGATGAGGTTTGTTTGGGGTGGGGACAGTCACAGCCTGGTTGTAGAAAATGTTGTTAGAAAAGAAGTTGTTGTTCAGATTGGGTTGGTTGAGGTTATGAAAATGGAGATTGATGCTTTGGGGAGGGAAATAGAAGGAAAGATAATAGAAGAACTAGTGGAAAATGTTGTGCTTGATTTTACAGGAAGAAGATGA 2517 0.3941 MSKEMKSKHNPSNVVAKLMGLETLSKGEPNLSVIRSQTKDYSQDMYAHLGWPLKHWKVEDKFMMDNKDMLLGVHHPSTEQIGHKDGYETWLQSQRGWWREDFDEGKMALVRKKFIEAKYLSTDKTLRQSKQFQDALDILSSNNDLLVRFLDSQKLYQLPSTPPDDSNCITLIKPLKMFGNDKSSGKGRKNDRLLKKPADSDQTAVWENMNRGYSPESTRIVVLKPSPGRTNELKALVSPTNPSPQSFYRGNANDNVLESIKVAKEIRMQMQMHKGLRSYQKDKTLLLSSAFSNGYSSDDSSYNKSYHDLEAMSPMPRHSWDCINVCGSPYSTQSMGRATCSPESSVCIEAKKRLSERWNTVTAKEKHHQEQRRVARNSTLGEMLSLSLVKKSVTSVVESANKHQEEPSKSISCSQSLDEEMSTDDSSQNVSSANPVPASSTVDEPGLCVDASIEHDDSKVGAKSKSKKSSFKGKVASFFFSMSKKSTKKKYSSSQSKDESETIVTETSVPSVNSPGDHVSQSSNVGGFEESLAALCDSSCKTSTDSFSCGQQEDMITLEPGLTESKSMVLEIPNEKQDRPSPISVLESPFEDYNTSHESLECMKGGHMGSLVRLKSNLIDKSPPIESVARTLSWDEDSFAELTRASSLDTKLEEHDWLLLVQKLLSASGLDDDQEQQHDSFHTRFHSLESPLDPSLRDNKDCTQPLNEAKRRKMRSNQKLVFDCVNAALLEVVGYGGSENYFKMYCGTHRKALVQEGSCLMDHIVTQMKELIANGMRFVWGGDSHSLVVENVVRKEVVVQIGLVEVMKMEIDALGREIEGKIIEELVENVVLDFTGRR* 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g4064 838 PANTHER DUF3741 FAMILY PROTEIN 1 837 - -
Tpr1g4064 838 MobiDBLite consensus disorder prediction 180 201 - -
Tpr1g4064 838 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 1 837 - -
Tpr1g4064 838 MobiDBLite consensus disorder prediction 497 524 - -
Tpr1g4064 838 MobiDBLite consensus disorder prediction 182 198 - -
Tpr1g4064 838 MobiDBLite consensus disorder prediction 398 443 - -
Tpr1g4064 838 Pfam Protein of unknown function (DUF3741) 111 152 IPR022212 -
Tpr1g4064 838 MobiDBLite consensus disorder prediction 490 524 - -
Tpr1g4064 838 MobiDBLite consensus disorder prediction 398 439 - -
Tpr1g4064 838 Pfam Domain of unknown function (DUF4378) 661 828 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g4064 Tpr-Chr1 46034612 46039004 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g4064 1 835 TRM (TON1 Recruiting Motif) Superfamily AT4G28760 34.922 2.49e-112 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g4064 - - mtr:MTR_1g069190 1222.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g4064 1 46034612 46039004 Tpr1g4064 1 46034612 46039004 ECH