Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g4046 ATGTCTAAAGAAATGAAGTCCAAGCACAATCCATCAAATGTAGTAGCCAAATTAATGGGGCTTGAAACCCTTTCAAAGGGAGAGCCTAATTTATCTGTGATTAGAAGCCAAACAAAAGATTATTCTCAAGACATGTATGCTCATTTAGGATGGCCATTGAAACATTGGAAGGTGGAAGATAAGTTTATGATGGATAATAAGGATATGCTTCTTGGAGTTCATCATCCAAGCACAGAACAGATTGGCCACAAAGATGGATATGAACCATGGCTGCAATCTCAGAGAGGATGGTGGAGAGAAGATTTTGATGAGGGGAAGATGGCTCTTGTCCGTAAAAAATTCATTGAAGCAAAGTATCTGTCGACAGATAAGACGTTGCGTCAATCCAAGCAATTTCAAGATGCATTGGATATTTTAAGCTCAAACAATGATCTCTTAGTCAGGTTTTTGGATTCACAAAAGCTTTATCAACTTCCCTCTACTCCACCGGACGATTCGAACTGCATTACCCTTATCAAACCTTTGAAGATGTTTGGAAATGACAAATCTTCCGGAAAGGGTAGGAAGAATGATAGATTGCTTAAGAAACCAGCAGATTCTGATCAGACGGCTGTATGGGAGAACATGAATCGTGGATACTCTCCGGAATCTACTCGAATAGTAGTATTGAAACCTAGTCCTGGGAGGACAAATGAACTTAAGGCTTTAGTTTCTCCAACAAATCCATCACCTCAAAGTTTCTATCGGGGAAATGCAAATGATAATGTACTTGAATCCATAAAAGTGGCTAAAGAGATTCGAATGCAAATGCAGATGCAAGAAGGTCTAAGAAGCTATCAAAAGGATAAAACGTTATTACTTTCCTCAGCATTTTCCAATGGTTATTCTAGTGATGATAGCTCATATAACAAATCATATCATGATTTGGAAGCTATGTCACCAATGCCAAGGCATTCATGGGATTGTATCAATGTATGTGGAAGTCCTTATTCTACGCAATCTATGGGTCGTGCAACATGTTCTCCCGAGTCATCGGTGTGCATAGAGGCAAAGAAACGGCTTTCTGAAAGATGGAATACAGTTACAGCTAAAGAAAAACATCATCAAGAACAAAGGCGTGTAGCGAGAAACTCTACCTTAGGTGAAATGCTTTCTCTTTCCCTTGTAAAGAAATCTGTAACTTCTGTGGTTGAGAGTGCTAATAAACACCAAGAAGAACCAAGTAAATCCATTTCTTGCAGTCAATCTCTCGATGAAGAAATGAGCACTGATGATTCATCTCAAAATGTTTCTTCAGCAAATCCTGTTCCTGCATCGTCTACTGTCGATGAACCCGGCCTCTGTGTTGATGCTAGCATAGAACATGATGACTCCAAGGTGGGGGCAAAGTCAAAGAGTAAGAAATCATCATTTAAAGGGAAAGTGGCAAGTTTCTTCTTTTCAATGAGTAAAAAATCAACCAAGAAAAAATATAGTTCATCTCAATCTAAAGATGAATCTGAAACTATTGTCACCGAAACATCGGTTCCATCAGTAAATTCACCTGGAGATCATGTGTCTCAAAGCTCAAACGTTGGTGGATTTGAAGAGTCTCTTGCAGCTTTGTGTGACTCTTCATGTAAAACATCAACAGATTCATTTTCTTGTGGACAACAAGAAGACATGATTACACTAGAGCCTGGATTGACTGAATCAAAGTCTATGGTGCTAGAGATTCCAAATGAAAAACAGGATCGGCCAAGTCCAATCTCAGTATTAGAATCTCCATTTGAAGATTATAATACAGCTCATGAGTCCTTGGAATGCATGAAGGGTGGTCACATGGGATCATTGGTGCGACTGAAGTCCAATTTAATTGACAAATCACCACCAATAGAATCAGTAGCTAGGACACTATCATGGGATGAAGATTCTTTTGCAGAGTTAACAAGGGCTTCTTCCTTAGACACCAAGTTAGAGGAACATGATTGGCTTCTCTTGGTCCAAAAGCTACTATCAGCGTCTGGACTAGATGATGATCAAGAACAACAACATGACTCATTTCACACAAGATTCCATTCCCTTGAAAGCCCATTGGATCCATCATTAAGGGACAATAAGGATTGTACTCAGCCACTAAATGAGGCCAAGAGAAGGAAAATGAGATCAAATCAGAAGCTTGTATTTGATTGTGTTAATGCTGCACTATTGGAAGTTGTTGGTTATGGGGGGTCAGAGAATTACTTCAAGATGTACTGTGGGACCCACAGGAAGGCCCTAGTTCAAGAGGGTTCATGTTTGATGGACCACATTGTGACCCAAATGAAGGAATTAATAGCAAATGGGATGAGGTTTGTTTGGGGTGGGGACAGTCACAGCCTGGTTGTAGAAAATGTTGTTAGAAAAGAAGTTGTTGTTCAGATTGGGTTGGTTGAGGTTATGAAAATGGAGATTGATGCTTTGGGGAGGGAAATAGAAGGAAAGATAATAGAAGAACTAGTGGAAAATGTTGTGCTTGATTTTACAGGAAGAAGATGA 2517 0.3953 MSKEMKSKHNPSNVVAKLMGLETLSKGEPNLSVIRSQTKDYSQDMYAHLGWPLKHWKVEDKFMMDNKDMLLGVHHPSTEQIGHKDGYEPWLQSQRGWWREDFDEGKMALVRKKFIEAKYLSTDKTLRQSKQFQDALDILSSNNDLLVRFLDSQKLYQLPSTPPDDSNCITLIKPLKMFGNDKSSGKGRKNDRLLKKPADSDQTAVWENMNRGYSPESTRIVVLKPSPGRTNELKALVSPTNPSPQSFYRGNANDNVLESIKVAKEIRMQMQMQEGLRSYQKDKTLLLSSAFSNGYSSDDSSYNKSYHDLEAMSPMPRHSWDCINVCGSPYSTQSMGRATCSPESSVCIEAKKRLSERWNTVTAKEKHHQEQRRVARNSTLGEMLSLSLVKKSVTSVVESANKHQEEPSKSISCSQSLDEEMSTDDSSQNVSSANPVPASSTVDEPGLCVDASIEHDDSKVGAKSKSKKSSFKGKVASFFFSMSKKSTKKKYSSSQSKDESETIVTETSVPSVNSPGDHVSQSSNVGGFEESLAALCDSSCKTSTDSFSCGQQEDMITLEPGLTESKSMVLEIPNEKQDRPSPISVLESPFEDYNTAHESLECMKGGHMGSLVRLKSNLIDKSPPIESVARTLSWDEDSFAELTRASSLDTKLEEHDWLLLVQKLLSASGLDDDQEQQHDSFHTRFHSLESPLDPSLRDNKDCTQPLNEAKRRKMRSNQKLVFDCVNAALLEVVGYGGSENYFKMYCGTHRKALVQEGSCLMDHIVTQMKELIANGMRFVWGGDSHSLVVENVVRKEVVVQIGLVEVMKMEIDALGREIEGKIIEELVENVVLDFTGRR* 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g4046 838 MobiDBLite consensus disorder prediction 180 201 - -
Tpr1g4046 838 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 1 837 - -
Tpr1g4046 838 MobiDBLite consensus disorder prediction 497 524 - -
Tpr1g4046 838 MobiDBLite consensus disorder prediction 182 198 - -
Tpr1g4046 838 Pfam Protein of unknown function (DUF3741) 111 152 IPR022212 -
Tpr1g4046 838 MobiDBLite consensus disorder prediction 490 524 - -
Tpr1g4046 838 MobiDBLite consensus disorder prediction 398 444 - -
Tpr1g4046 838 PANTHER DUF3741 FAMILY PROTEIN 1 837 - -
Tpr1g4046 838 MobiDBLite consensus disorder prediction 398 439 - -
Tpr1g4046 838 Pfam Domain of unknown function (DUF4378) 661 828 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g4046 Tpr-Chr1 45753958 45758865 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g4046 1 835 TRM (TON1 Recruiting Motif) Superfamily AT4G28760 34.812 6.28e-112 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g4046 - - mtr:MTR_1g069190 1219.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3409 6 36796615 36802360 Tpr1g4046 1 45753958 45758865 PCT