Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g4027 ATGGATCATGTGATTGGTGGAAAGTTTAAACTAGGAAGGAAAATTGGGAGTGGCTCTTTTGGGGAGCTTTATCTAGCTGTTAATATACAAACTGGAGAGGAGGTGGCTGTTAAGCTGGAATCTGTGAAGACCAGACATCCGCAGCTTCACTATGAGTCAAAATTGTATATGCTTCTTCAAGGAGGAACAGGAATTCCCCACCTCAAATGGTTTGGTGTTGAGGGAGAGTACAATGTCATGGTTATTGACCTTCTTGGACCAAGTCTGGAAGATTTATTCAATTATTGTAACCGGAAATTCACATTGAAGTCAGTGTTGATGCTTGCCGAACAATTAATTAACAGAGTTGAATACATGCATTCAAGAGGCTTTCTTCACCGAGACATAAAGCCAGACAATTTTCTGATGGGCCTCGGGCGTAAAGCAAATCAAGTGTACGTGATTGACTACGGTCTTGGAAAAAAATACAGGGATCTTCAGACTCATAGGCACATACCATACAGGGAAAACAAGAACCTTACAGGCACAGCACGCTATGCAAGTGTCAACACTCATCTTGGAATCGAACAAAGCCGAAGGGATGATCTGGAATCTCTTGGTTATGTGCTCATGTATTTCTTAAGAGGAAGTCTTCCCTGGCAAGGACTGAGGGCTGGAAACAAAAAACAAAAATATGATAAAATTAGTGAGACGAAGGTGTCAACTTCGATAGAGTATCTCTGCAAATCATATCCCTCTGAGTTTGTATCATACTTCCACTATTGCCGATCATTGAGGTTTGAGGACAAGCCAGATTATTCATATTTGAAGAGACTTTTCCGAGATCTATTTATTCGAGAAGGCTATCAATTTGACTATGTTTTTGACTGGACTGTTTTGAAGTATCCACAAGCTGGTGGCACTTCTAGAGGACGGCCTGGCAAGGCAGCTATGTATGCACCTACGCCTGGACGGCAGCAACCAGACAAGACACCTGCACGTCATCCTGAAAGGACACCTGCACGTTATTATCCAGAAAGGACACCTGCACGTTATCCAGAAAGGACACCTGGACGTCAATTTCCCCAACAACCAGAAAGGATGCAAGTTGGGAGAGACATTCGAGAGAAATTATCTGGTGCTGTTGAAGCATTCACCCAGAGGAACCGCGCAAATGCTACTCCTCATCATCCTCATCATGGCGAACACGTTAGACATAAGACTTATGACGAAGTGCAATATGCCCAACACAATCCAACTCGATATGAAAGCAATTCGAGAAGAGCCGTGATATCATCAAACAAGCCAAATTCCTCAGGTGACCATACTGGCAGGATGGCTTCAGGTGGGGCCCGTCCAGCTGCCGCGCATAGAGGTCAACCTGTGTATGAGACCAGACAACCAACTTTTGCACGTAGTGGGTCAATGAGAGGCAACCGTGATGATCCTCTGAGGAACTTTGAACTCCTCACTATCAGGAGGTAA 1464 0.4426 MDHVIGGKFKLGRKIGSGSFGELYLAVNIQTGEEVAVKLESVKTRHPQLHYESKLYMLLQGGTGIPHLKWFGVEGEYNVMVIDLLGPSLEDLFNYCNRKFTLKSVLMLAEQLINRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYVIDYGLGKKYRDLQTHRHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLRAGNKKQKYDKISETKVSTSIEYLCKSYPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTVLKYPQAGGTSRGRPGKAAMYAPTPGRQQPDKTPARHPERTPARYYPERTPARYPERTPGRQFPQQPERMQVGRDIREKLSGAVEAFTQRNRANATPHHPHHGEHVRHKTYDEVQYAQHNPTRYESNSRRAVISSNKPNSSGDHTGRMASGGARPAAAHRGQPVYETRQPTFARSGSMRGNRDDPLRNFELLTIRR* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g4027 487 MobiDBLite consensus disorder prediction 413 475 - -
Tpr1g4027 487 MobiDBLite consensus disorder prediction 413 437 - -
Tpr1g4027 487 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g4027 487 Gene3D Transferase(Phosphotransferase) domain 1 1 327 - -
Tpr1g4027 487 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g4027 487 SMART serkin_6 9 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g4027 487 PANTHER CASEIN KINASE 1-LIKE PROTEIN 10 1 476 - -
Tpr1g4027 487 PANTHER CASEIN KINASE-RELATED 1 476 - -
Tpr1g4027 487 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Tpr1g4027 487 MobiDBLite consensus disorder prediction 323 346 - -
Tpr1g4027 487 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Tpr1g4027 487 MobiDBLite consensus disorder prediction 299 359 - -
Tpr1g4027 487 SUPERFAMILY Protein kinase-like (PK-like) 4 290 IPR011009 -
Tpr1g4027 487 CDD STKc_CK1_delta_epsilon 8 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g4027 Tpr-Chr1 45339293 45346674 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g4027 8 213 MAP Kinase Kinase Kinase AT3G06030 25.000 4.66e-13 69.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Tpr1g4027 Pkinase 6.1e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g4027 K08960 - gmx:100789031 738.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3320 6 35820453 35825778 Tpr1g4027 1 45339293 45346674 PCT