Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3996 ATGATGAACAAGAAGCCAAATTGGTTTTCCAATGTGAAGAAAGCTCTTAGCCCTGACACAAAGGAAAACAAAAACCAGGCAAGAAGAGCATTGAGGGCTTTAAGGGGGCTGGACAGGTTGAGATCGCTAATGGAAGGGCTAGTTGTGAAACGTCAAGCCATTAGTACCCTTCGCTCTATGCAGACTTTAGGTCATGTGCAATCCCAGATTCGTTCGAGGCGGCTCAGGATACTAGAGGAGACTCAAGCTCTGCAAAAACAGCTCTTACAGAAGCACACAAAAGAGCTAGAGATACAGATTGGGGAGGAATGGGATGAAAGCATACAATCAAGAGAACAAATTGAAGCCAAGTTACTAAGCAAGTACGAGGCTGCTATGAGAAGAGAAAGAGCAATGGCTTATTCATTCACTCATCAGAAAAATGGGAGGAATTCATCGAAATCTATAAATCCTATGTTCACGGATCCAACCAATCCTGCTTGGGGATGGAGCTGGTTGGAACGTTGGATGGCGGCCAACCAAAGCCTGATGGAAAAAGAGAAAAATTCATCTGCAAAAAGTTCAATCAGCGGGATCACCAGTGCTGAAATCAGCAAATCATTTGCTCGTTTCCAGCTCAATTCTGAAAAGCATTCTCCAACAGCCAGCCAAAATCCGGGTTCGCCTAACTTCCAGTCCATTCCAAAGCCTCCCAAGCCAACAGTCGGTAAGAAACTGAACAAGGCAAGCCCAAAGGAAAGCTTTATTATGGACAATGATACCAAAAGCATGACGAGTGTGCAGTCAGAGAGAGTCCGGAGGAGGCACTCCATTGCTGGATCAACAGTGAAGGATGATGAAAGCCTTGCAAGCTCTCCATCAGTTCCAAGTTACATGGTGCCAACTAAATCTGCAAAAGCTAAGTCTAGGTTGCAAAGTCCATTAGCTGCAGAAAATGGAACACCAGAGAAAGGGTCCTTTGGAAATGCGAAGAAACGTCTCAATTTCCTGGCTTCGCCTGCTAGATCAAGGCGCCATTCTGGTCCACCAAAAGTAGAAAGCAGCTTAAATGCAGAAATCACCGTTTGA 1068 0.4513 MMNKKPNWFSNVKKALSPDTKENKNQARRALRALRGLDRLRSLMEGLVVKRQAISTLRSMQTLGHVQSQIRSRRLRILEETQALQKQLLQKHTKELEIQIGEEWDESIQSREQIEAKLLSKYEAAMRRERAMAYSFTHQKNGRNSSKSINPMFTDPTNPAWGWSWLERWMAANQSLMEKEKNSSAKSSISGITSAEISKSFARFQLNSEKHSPTASQNPGSPNFQSIPKPPKPTVGKKLNKASPKESFIMDNDTKSMTSVQSERVRRRHSIAGSTVKDDESLASSPSVPSYMVPTKSAKAKSRLQSPLAAENGTPEKGSFGNAKKRLNFLASPARSRRHSGPPKVESSLNAEITV* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3996 355 PANTHER IQ-DOMAIN 5-RELATED 26 351 - -
Tpr1g3996 355 MobiDBLite consensus disorder prediction 207 223 - -
Tpr1g3996 355 MobiDBLite consensus disorder prediction 277 292 - -
Tpr1g3996 355 MobiDBLite consensus disorder prediction 1 26 - -
Tpr1g3996 355 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 26 351 - -
Tpr1g3996 355 MobiDBLite consensus disorder prediction 260 275 - -
Tpr1g3996 355 MobiDBLite consensus disorder prediction 207 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3996 Tpr-Chr1 44818044 44827184 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3996 27 347 IQD Protein Family AT5G03040 56.587 7.87e-107 319
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3996 - - gmx:100799058 476.092
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0936 6 8269150 8273245 Tpr1g3996 1 44818044 44827184 PCT