Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr1g3987 | ATGGAACCTTTCTTTCTCTCCGCTCTCTCATTCATCCTCTTACTTTTCTTCCCTTTTTCCTCTGCTCAGATGCCAGGTTTTGTAAGTTTGGACTGTGGAGGTGATAAAAATTTCACCGATGAAATTGGTCTTAAATGGACTCCTGATGATAAGATTACTTATGGAGATATAAGTACTATTTCGGTTGCCAACGAGACACGGAAGCAATACACGACACTTAGACACTTTCCTGCCGATTCCAGAAAATACTGCTATACACTTGATGTTGTCAGTAGGACAAGGTATCTACTGAGGGCAACATTCTTGTATGGAGACTTTGATAACAACAATGTTTATCCGAAATTTGACATTTCTATTGGGGCTACTGATTGGTCTACTATTGTTATATCTGATGCAAACACTATAGAAGTAAGAGAAATTATTTTTTTGGCTTCAAGTCCTACTGTTAGTGTATGTCTATCCAATGCAACAACTGGGCAGCCATTCATATCTACACTTGAACTTAGGCAATTCAACGGTTCAGTTTACTTTACATTCTTTGAGGAAGACTTTTACCTCAGCGTCTCTGCGAGGATAAATTTTGGTGCAGAGAGTGATGCCCCAGTTAGGTATCCTGATGACCCGTTTGATAGAATTTGGGAGTCAGATTCTGTCAAGAAAGCAAATTACCTCGTTGACGTTGCTTATGGAACCGAGAAAATTTCCACCAATGTATCAATTGATACCAACAGAGATGAAATGCCACCAGTGAAAGTAATGCAGACAGCTGTAGTAGGTACAAATGGATCTCTAACATACCGGTTGAACTTGGATGGTTTTCCTGCTATGGGACGGGCATTCAGCTATCTTGCAGAGATAGAAGATTTTCCGCATAATGAATCTCGAAAATTCAGGCTAGTACTTCCAGGCCAGACGGAAATTAGTAAGGCCGTGGTAAATATCGAAGAGAATGCTCCAGGAAAATATTGTGTTTATGAACCGGGATTTAACAATGTATCCCTACCGTTTGTGATGTCCTTTAAATTAGCCAAAACATCTGATTCTTCCAAGGGTCCTCTTCTCAATGCCATGGAGATTAATAAGTATCTAGAGAAAAATGATGGCTCTCCTGATGGAGAAGCTATATCTAGTGTACTTTCTCACTACTCGTCAGCAGATTGGGCACAAGAAGGGGGTGATCCATGTTTACCTGTTCCTTGGTCGTGGGTCCGATGTAGCTCAGATCAACAGCCAAGAATAGTTTCAATTTTGTTGTCTGGGAAAAACATGACGGGCGATATTCCTTTGGACATCACCAAATTGACTGGTCTGGTTGAAATATGGCTTGATGGAAATATGCTAACAGGCCCAATACCAGATTTCACCGGATGCATGTACTTAAAGATAATTCATCTTGAGAACAATCAGTTGGCGGGTGTGCTCCCAGCCTCTTTGGGGAGCCTTCCGAATTTGAAGGAACTGTATGTCCAGAACAATATGTTATCTGGATCTGTACCGTCAGAACTTTTGAGCAAATCTTTGCTGTTTAACTACTCCGGAAACAACGGTCTTAATAAAGGAAGCAGAAAAAACAATCAATTGTATGTCATTATTGGTTCAGCAGTTGGGGCCGCCATTTTACTTTTGGCTACTATTATATCATGTTTGTGTATGCATAAGGGAAAGAGTAAATACTACGATCAAGACCACCTTGTTTCACTCTCTACTCAAAACCTGGAATCTAAGAGTGATGGCCATGCAGAAGTTGCTCACTGCTTCAGTTTTTCTGAAATTGAAAGCTCCACAAATAATTTTGAGAAGAAAATTGGATCTGGAGGTTTTGGAGTTGTTTACTATGGGAAACAGAAAGATGGAAGAGAAATAGCAGTTAAAGTTTTAACTAGTAATTCATATCAAGGCAAAAAAGAGTTCTCAAATGAGGTGACTCTTCTGTCAAGGATACATCACAGAAACTTAGTACAGCTTCTAGGTTATTGCCGAGAAGAAGGGAATAGTATTCTTATTTATGAGTTCATGCATAATGGAACTCTCAAGGAACATCTTTATGGCCCATTAACACACGGACGGAGTATTAATTGGATTAAGCGACTTGAGATCGCCGAAGATTCTGCCAAAGGGATTGAGTATCTACACACGGGATGTGTCCCAGCAGTTATCCATAGAGACCTAAAAAGCAGCAACATTCTTCTTGACAGGCACATGAGAGCTAAGGTTTCAGATTTTGGGCTTTCGAAACTTGCTGTTGATGGAGCCTCTCACGTCTCTAGCATAGTTCGTGGTACAGTAGGATATCTGGATCCTGAGTACTATATTTCTCAGCAGCTAACTGACAAGAGCGATGTTTATAGTTTTGGGGTAATTCTTCTTGAACTCATATCTGGTCAAGAAGCAATATCTAATGATAGCTTTGGTGCTAATTGCAGAAACATAGTCCAATGGGCAAAAATGCACATTGAGAGTGGTGATATACAAGGTATAATAGATCCAGCATTACGAGGAGACTATGACTTACAATCAATGTGGAAAATAGCAGAGAAAGCGTTGATGTGCGTTCAAGCACATGGACACATGAGGCCATCAATATCAGAAGTTGTGAAAGAAATTCAAGACGCAATTGCTATTGAAAGAGAGGCAGAAAGCATCTCAGAGGATGAGAATATGACAAGAAATTCAGTTCACTCTTCCATCAACATGGGTTCTATGGATCTTGCTGCAGCGGAGAATTACCTCGCTATTGATGATTCCATTGCACGCCCCGCACCACGATAG | 2769 | 0.4041 | MEPFFLSALSFILLLFFPFSSAQMPGFVSLDCGGDKNFTDEIGLKWTPDDKITYGDISTISVANETRKQYTTLRHFPADSRKYCYTLDVVSRTRYLLRATFLYGDFDNNNVYPKFDISIGATDWSTIVISDANTIEVREIIFLASSPTVSVCLSNATTGQPFISTLELRQFNGSVYFTFFEEDFYLSVSARINFGAESDAPVRYPDDPFDRIWESDSVKKANYLVDVAYGTEKISTNVSIDTNRDEMPPVKVMQTAVVGTNGSLTYRLNLDGFPAMGRAFSYLAEIEDFPHNESRKFRLVLPGQTEISKAVVNIEENAPGKYCVYEPGFNNVSLPFVMSFKLAKTSDSSKGPLLNAMEINKYLEKNDGSPDGEAISSVLSHYSSADWAQEGGDPCLPVPWSWVRCSSDQQPRIVSILLSGKNMTGDIPLDITKLTGLVEIWLDGNMLTGPIPDFTGCMYLKIIHLENNQLAGVLPASLGSLPNLKELYVQNNMLSGSVPSELLSKSLLFNYSGNNGLNKGSRKNNQLYVIIGSAVGAAILLLATIISCLCMHKGKSKYYDQDHLVSLSTQNLESKSDGHAEVAHCFSFSEIESSTNNFEKKIGSGGFGVVYYGKQKDGREIAVKVLTSNSYQGKKEFSNEVTLLSRIHHRNLVQLLGYCREEGNSILIYEFMHNGTLKEHLYGPLTHGRSINWIKRLEIAEDSAKGIEYLHTGCVPAVIHRDLKSSNILLDRHMRAKVSDFGLSKLAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNDSFGANCRNIVQWAKMHIESGDIQGIIDPALRGDYDLQSMWKIAEKALMCVQAHGHMRPSISEVVKEIQDAIAIEREAESISEDENMTRNSVHSSINMGSMDLAAAENYLAIDDSIARPAPR* | 923 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr1g3987 | 922 | ProSitePatterns | Protein kinases ATP-binding region signature. | 602 | 624 | IPR017441 | GO:0005524 | |
Tpr1g3987 | 922 | Pfam | Protein tyrosine and serine/threonine kinase | 598 | 867 | IPR001245 | GO:0004672|GO:0006468 | |
Tpr1g3987 | 922 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 718 | 730 | IPR008271 | GO:0004672|GO:0006468 | |
Tpr1g3987 | 922 | Gene3D | Transferase(Phosphotransferase) domain 1 | 672 | 896 | - | - | |
Tpr1g3987 | 922 | PANTHER | TYROSINE KINASE DOMAIN PROTEIN | 12 | 912 | - | - | |
Tpr1g3987 | 922 | SUPERFAMILY | L domain-like | 398 | 504 | - | - | |
Tpr1g3987 | 922 | Gene3D | Ribonuclease Inhibitor | 373 | 528 | IPR032675 | - | |
Tpr1g3987 | 922 | Gene3D | Phosphorylase Kinase; domain 1 | 568 | 671 | - | - | |
Tpr1g3987 | 922 | SMART | serkin_6 | 596 | 872 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr1g3987 | 922 | SUPERFAMILY | Protein kinase-like (PK-like) | 583 | 870 | IPR011009 | - | |
Tpr1g3987 | 922 | Pfam | Malectin-like domain | 30 | 360 | IPR024788 | - | |
Tpr1g3987 | 922 | PANTHER | OS07G0107800 PROTEIN-RELATED | 12 | 912 | - | - | |
Tpr1g3987 | 922 | ProSiteProfiles | Protein kinase domain profile. | 596 | 872 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr1g3987 | 922 | CDD | STKc_IRAK | 602 | 869 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr1g3987 | Tpr-Chr1 | 44726700 | 44732288 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr1g3987 | 17 | 706 | Receptor kinase-like Gene Family | AT2G37050 | 66.332 | 0.0 | 971 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-I-1 | Tpr1g3987 | Malectin_like | 3.9e-76 | CL0202 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr1g3987 | - | - | gmx:100798007 | 1555.81 |