Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3987 ATGGAACCTTTCTTTCTCTCCGCTCTCTCATTCATCCTCTTACTTTTCTTCCCTTTTTCCTCTGCTCAGATGCCAGGTTTTGTAAGTTTGGACTGTGGAGGTGATAAAAATTTCACCGATGAAATTGGTCTTAAATGGACTCCTGATGATAAGATTACTTATGGAGATATAAGTACTATTTCGGTTGCCAACGAGACACGGAAGCAATACACGACACTTAGACACTTTCCTGCCGATTCCAGAAAATACTGCTATACACTTGATGTTGTCAGTAGGACAAGGTATCTACTGAGGGCAACATTCTTGTATGGAGACTTTGATAACAACAATGTTTATCCGAAATTTGACATTTCTATTGGGGCTACTGATTGGTCTACTATTGTTATATCTGATGCAAACACTATAGAAGTAAGAGAAATTATTTTTTTGGCTTCAAGTCCTACTGTTAGTGTATGTCTATCCAATGCAACAACTGGGCAGCCATTCATATCTACACTTGAACTTAGGCAATTCAACGGTTCAGTTTACTTTACATTCTTTGAGGAAGACTTTTACCTCAGCGTCTCTGCGAGGATAAATTTTGGTGCAGAGAGTGATGCCCCAGTTAGGTATCCTGATGACCCGTTTGATAGAATTTGGGAGTCAGATTCTGTCAAGAAAGCAAATTACCTCGTTGACGTTGCTTATGGAACCGAGAAAATTTCCACCAATGTATCAATTGATACCAACAGAGATGAAATGCCACCAGTGAAAGTAATGCAGACAGCTGTAGTAGGTACAAATGGATCTCTAACATACCGGTTGAACTTGGATGGTTTTCCTGCTATGGGACGGGCATTCAGCTATCTTGCAGAGATAGAAGATTTTCCGCATAATGAATCTCGAAAATTCAGGCTAGTACTTCCAGGCCAGACGGAAATTAGTAAGGCCGTGGTAAATATCGAAGAGAATGCTCCAGGAAAATATTGTGTTTATGAACCGGGATTTAACAATGTATCCCTACCGTTTGTGATGTCCTTTAAATTAGCCAAAACATCTGATTCTTCCAAGGGTCCTCTTCTCAATGCCATGGAGATTAATAAGTATCTAGAGAAAAATGATGGCTCTCCTGATGGAGAAGCTATATCTAGTGTACTTTCTCACTACTCGTCAGCAGATTGGGCACAAGAAGGGGGTGATCCATGTTTACCTGTTCCTTGGTCGTGGGTCCGATGTAGCTCAGATCAACAGCCAAGAATAGTTTCAATTTTGTTGTCTGGGAAAAACATGACGGGCGATATTCCTTTGGACATCACCAAATTGACTGGTCTGGTTGAAATATGGCTTGATGGAAATATGCTAACAGGCCCAATACCAGATTTCACCGGATGCATGTACTTAAAGATAATTCATCTTGAGAACAATCAGTTGGCGGGTGTGCTCCCAGCCTCTTTGGGGAGCCTTCCGAATTTGAAGGAACTGTATGTCCAGAACAATATGTTATCTGGATCTGTACCGTCAGAACTTTTGAGCAAATCTTTGCTGTTTAACTACTCCGGAAACAACGGTCTTAATAAAGGAAGCAGAAAAAACAATCAATTGTATGTCATTATTGGTTCAGCAGTTGGGGCCGCCATTTTACTTTTGGCTACTATTATATCATGTTTGTGTATGCATAAGGGAAAGAGTAAATACTACGATCAAGACCACCTTGTTTCACTCTCTACTCAAAACCTGGAATCTAAGAGTGATGGCCATGCAGAAGTTGCTCACTGCTTCAGTTTTTCTGAAATTGAAAGCTCCACAAATAATTTTGAGAAGAAAATTGGATCTGGAGGTTTTGGAGTTGTTTACTATGGGAAACAGAAAGATGGAAGAGAAATAGCAGTTAAAGTTTTAACTAGTAATTCATATCAAGGCAAAAAAGAGTTCTCAAATGAGGTGACTCTTCTGTCAAGGATACATCACAGAAACTTAGTACAGCTTCTAGGTTATTGCCGAGAAGAAGGGAATAGTATTCTTATTTATGAGTTCATGCATAATGGAACTCTCAAGGAACATCTTTATGGCCCATTAACACACGGACGGAGTATTAATTGGATTAAGCGACTTGAGATCGCCGAAGATTCTGCCAAAGGGATTGAGTATCTACACACGGGATGTGTCCCAGCAGTTATCCATAGAGACCTAAAAAGCAGCAACATTCTTCTTGACAGGCACATGAGAGCTAAGGTTTCAGATTTTGGGCTTTCGAAACTTGCTGTTGATGGAGCCTCTCACGTCTCTAGCATAGTTCGTGGTACAGTAGGATATCTGGATCCTGAGTACTATATTTCTCAGCAGCTAACTGACAAGAGCGATGTTTATAGTTTTGGGGTAATTCTTCTTGAACTCATATCTGGTCAAGAAGCAATATCTAATGATAGCTTTGGTGCTAATTGCAGAAACATAGTCCAATGGGCAAAAATGCACATTGAGAGTGGTGATATACAAGGTATAATAGATCCAGCATTACGAGGAGACTATGACTTACAATCAATGTGGAAAATAGCAGAGAAAGCGTTGATGTGCGTTCAAGCACATGGACACATGAGGCCATCAATATCAGAAGTTGTGAAAGAAATTCAAGACGCAATTGCTATTGAAAGAGAGGCAGAAAGCATCTCAGAGGATGAGAATATGACAAGAAATTCAGTTCACTCTTCCATCAACATGGGTTCTATGGATCTTGCTGCAGCGGAGAATTACCTCGCTATTGATGATTCCATTGCACGCCCCGCACCACGATAG 2769 0.4041 MEPFFLSALSFILLLFFPFSSAQMPGFVSLDCGGDKNFTDEIGLKWTPDDKITYGDISTISVANETRKQYTTLRHFPADSRKYCYTLDVVSRTRYLLRATFLYGDFDNNNVYPKFDISIGATDWSTIVISDANTIEVREIIFLASSPTVSVCLSNATTGQPFISTLELRQFNGSVYFTFFEEDFYLSVSARINFGAESDAPVRYPDDPFDRIWESDSVKKANYLVDVAYGTEKISTNVSIDTNRDEMPPVKVMQTAVVGTNGSLTYRLNLDGFPAMGRAFSYLAEIEDFPHNESRKFRLVLPGQTEISKAVVNIEENAPGKYCVYEPGFNNVSLPFVMSFKLAKTSDSSKGPLLNAMEINKYLEKNDGSPDGEAISSVLSHYSSADWAQEGGDPCLPVPWSWVRCSSDQQPRIVSILLSGKNMTGDIPLDITKLTGLVEIWLDGNMLTGPIPDFTGCMYLKIIHLENNQLAGVLPASLGSLPNLKELYVQNNMLSGSVPSELLSKSLLFNYSGNNGLNKGSRKNNQLYVIIGSAVGAAILLLATIISCLCMHKGKSKYYDQDHLVSLSTQNLESKSDGHAEVAHCFSFSEIESSTNNFEKKIGSGGFGVVYYGKQKDGREIAVKVLTSNSYQGKKEFSNEVTLLSRIHHRNLVQLLGYCREEGNSILIYEFMHNGTLKEHLYGPLTHGRSINWIKRLEIAEDSAKGIEYLHTGCVPAVIHRDLKSSNILLDRHMRAKVSDFGLSKLAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNDSFGANCRNIVQWAKMHIESGDIQGIIDPALRGDYDLQSMWKIAEKALMCVQAHGHMRPSISEVVKEIQDAIAIEREAESISEDENMTRNSVHSSINMGSMDLAAAENYLAIDDSIARPAPR* 923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3987 922 ProSitePatterns Protein kinases ATP-binding region signature. 602 624 IPR017441 GO:0005524
Tpr1g3987 922 Pfam Protein tyrosine and serine/threonine kinase 598 867 IPR001245 GO:0004672|GO:0006468
Tpr1g3987 922 ProSitePatterns Serine/Threonine protein kinases active-site signature. 718 730 IPR008271 GO:0004672|GO:0006468
Tpr1g3987 922 Gene3D Transferase(Phosphotransferase) domain 1 672 896 - -
Tpr1g3987 922 PANTHER TYROSINE KINASE DOMAIN PROTEIN 12 912 - -
Tpr1g3987 922 SUPERFAMILY L domain-like 398 504 - -
Tpr1g3987 922 Gene3D Ribonuclease Inhibitor 373 528 IPR032675 -
Tpr1g3987 922 Gene3D Phosphorylase Kinase; domain 1 568 671 - -
Tpr1g3987 922 SMART serkin_6 596 872 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3987 922 SUPERFAMILY Protein kinase-like (PK-like) 583 870 IPR011009 -
Tpr1g3987 922 Pfam Malectin-like domain 30 360 IPR024788 -
Tpr1g3987 922 PANTHER OS07G0107800 PROTEIN-RELATED 12 912 - -
Tpr1g3987 922 ProSiteProfiles Protein kinase domain profile. 596 872 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3987 922 CDD STKc_IRAK 602 869 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3987 Tpr-Chr1 44726700 44732288 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3987 17 706 Receptor kinase-like Gene Family AT2G37050 66.332 0.0 971
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Tpr1g3987 Malectin_like 3.9e-76 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3987 - - gmx:100798007 1555.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0948 6 8350445 8355477 Tpr1g3987 1 44726700 44732288 PCT