Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3984 ATGCCTCCGAAGCAATCAAAAGCTGATGTAGCGAAGAAGCAGAAGGTTGTAGAAGACAAAACTTTCGGTCTCAAGAACAAAAACAAAAGCAAAGCTGTACAGAAATATGTTCAGAATCTCAAATCATCTGTGCAGCCCAAAATCGACCCCAAAGTCGATGCAAAGAAAAAGAAGGAGGAAGAGAAGGCCAAGGAGAAGGAGCTGAATGATTTGTTCAAAATTGCTGTTAGTCAGCCTAAAGTCCCACCAGGTGTTGATCCCAAGTCTATATTATGTGAGTTTTTTAAAGTGGGGCAGTGTGCTAAGGGTTTCAAATGCAAATTTTCCCATGATTTGAATGTTCAGAGGAAAGGGGAAAAGATTGACATATATAGTGATAAGCGTGACGATGAAACAATGGAGGAATGGGATCAAGAGACATTGGAGAAAGTGGTGGAGTCGAAGAAAAATGAGTATAATCAGAACAAACCAACTGACATTGTTTGTAAACACTTTTTGGATGCGGTAGAGAGGAAGCAATATGGTTGGTTTTGGCAATGCCCCAATGGTGGTAAGAATTGTCACTATAGACATGCACTTCCACCTGGGTATGTTTTAAAATCCCAAATGAAGGCTTTGTTAGAGGAAGAATCTGATAAAATGCCAATTGAAGAGGAAATTGAAAAGCAGCGGGCCCAAGTGAAAACTACAACTCCCATGACTCCTGAGTTGTTCATGCAATGGAAGAAGAAAAAGTTGGACGAGAGAGATGCCAGTTTGGCTGCCCAACAGGCAGAGAGGGCTAAGAATGACCGTATGAGTGGTCGTGAGCTGTTTTTGTCGGATGCTAGCTTGTTTGTGGATGATGCGGAAGCATATGACAAGTACCAAAGAGAACCAGAACCTGATGAAACTGAACAGAATGGGAATGGGAGTGCTGCTAATAATGGTCCCAGCACCTCAGCAGCAGGTGGTGCTGATGATGAAGTTCCTGATGACATTGATGACGATGAATTGGACTTGGATGAGTTAAATGAACTGGAAGCTAGTCTAGCCAAGACATCAATTCAAATTAATGAACCAGGAGCTGAAGCTTAA 1077 0.4206 MPPKQSKADVAKKQKVVEDKTFGLKNKNKSKAVQKYVQNLKSSVQPKIDPKVDAKKKKEEEKAKEKELNDLFKIAVSQPKVPPGVDPKSILCEFFKVGQCAKGFKCKFSHDLNVQRKGEKIDIYSDKRDDETMEEWDQETLEKVVESKKNEYNQNKPTDIVCKHFLDAVERKQYGWFWQCPNGGKNCHYRHALPPGYVLKSQMKALLEEESDKMPIEEEIEKQRAQVKTTTPMTPELFMQWKKKKLDERDASLAAQQAERAKNDRMSGRELFLSDASLFVDDAEAYDKYQREPEPDETEQNGNGSAANNGPSTSAAGGADDEVPDDIDDDELDLDELNELEASLAKTSIQINEPGAEA* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3984 358 Pfam DRG Family Regulatory Proteins, Tma46 214 294 IPR032378 -
Tpr1g3984 358 Gene3D - 203 277 - -
Tpr1g3984 358 PANTHER ZINC FINGER-CONTAINING PROTEIN P48ZNF 1 357 - -
Tpr1g3984 358 Gene3D - 86 202 - -
Tpr1g3984 358 ProSiteProfiles Zinc finger C3H1-type profile. 86 113 IPR000571 GO:0046872
Tpr1g3984 358 MobiDBLite consensus disorder prediction 321 338 - -
Tpr1g3984 358 ProSiteProfiles Zinc finger C3H1-type profile. 156 194 IPR000571 GO:0046872
Tpr1g3984 358 Coils Coil 51 71 - -
Tpr1g3984 358 SMART c3hfinal6 156 193 IPR000571 GO:0046872
Tpr1g3984 358 SMART c3hfinal6 86 112 IPR000571 GO:0046872
Tpr1g3984 358 MobiDBLite consensus disorder prediction 299 315 - -
Tpr1g3984 358 MobiDBLite consensus disorder prediction 285 358 - -
Tpr1g3984 358 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 21 1 357 - -
Tpr1g3984 358 SUPERFAMILY CCCH zinc finger 86 111 IPR036855 GO:0046872
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Tpr1g3984 DFRP_C 3.8e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3984 - - gmx:100806617 555.444