Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr1g3982 | ATGAACTCCAATTCTCACTCAATGGCAACACCAACACCAACACCAACACCAGCACCAACTAGTGGTGGAGATGCTTCTAGCAAGAAAATTAGAAAGCCATACACCATTACCAAGTCCAGGGAAAGCTGGTCTGACGAAGAACACGACAAGTTTCTTGAAGCTCTTCAATTATTTGATAGGGATTGGAAGAAAATTGAAGATTTTGTAGGTTCTAAAACTGTTATTCAGATTCGAAGCCATGCCCAAAAGTACTTCTTAAAGGTTCAAAAAAATGGAACACTAGCCCATGTTCCTCCTCCTCGTCCTAAGCGCAAAGCTATTCATCCTTATCCACAAAAAGCAACCAAAAATGTTTTGCTGCCACTTCCAGCATCCATTGCTTATGGATCATCCACAAATAGCCTTTTACCTGCAGGCTATGTCACATGGGATGAAACTTCCATGCTCATGGATAGTTGTCAGGATGAACTCAACAATCTTCATGGAAATGAAGCTGATATTGGATCGAAGGGGATTAGCAACAGTGATCTAATTGGTGTTGGAGACTCTACTACGAGGCTCACCGCTTCTCAAATACCAAATCAAGGGAAACAGAATCCTGTAACTCATGGATTGCCAGACTTTGCTGAAGTTTACGGTTTCATTGGAAGTGTTTTTGATCCGGATACAAATGGCCATGTACAGAAGCTTAAGGAAATGGATCCTATAAACTTTGAAACTGTTTTGTTGTTAATGAGAAACCTCACTGTCAATTTGTCTAGCCCGAATTTTGATCCCATTAAGAAGGCAATGTCAACATATGATGTGAATAACGATGCTGATGTGAAGAAGCAGGCAAATGATGTATCATGTCAAAACACTTGA | 864 | 0.4039 | MNSNSHSMATPTPTPTPAPTSGGDASSKKIRKPYTITKSRESWSDEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKNGTLAHVPPPRPKRKAIHPYPQKATKNVLLPLPASIAYGSSTNSLLPAGYVTWDETSMLMDSCQDELNNLHGNEADIGSKGISNSDLIGVGDSTTRLTASQIPNQGKQNPVTHGLPDFAEVYGFIGSVFDPDTNGHVQKLKEMDPINFETVLLLMRNLTVNLSSPNFDPIKKAMSTYDVNNDADVKKQANDVSCQNT* | 288 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr1g3982 | 287 | ProSiteProfiles | Myb-like domain profile. | 35 | 85 | IPR001005 | - | |
Tpr1g3982 | 287 | MobiDBLite | consensus disorder prediction | 1 | 42 | - | - | |
Tpr1g3982 | 287 | PANTHER | SWI/SNF COMPLEX-RELATED | 13 | 276 | - | - | |
Tpr1g3982 | 287 | SUPERFAMILY | Homeodomain-like | 34 | 90 | IPR009057 | - | |
Tpr1g3982 | 287 | SMART | sant | 39 | 87 | IPR001005 | - | |
Tpr1g3982 | 287 | ProSiteProfiles | SANT domain profile. | 38 | 91 | IPR017884 | - | |
Tpr1g3982 | 287 | CDD | SANT | 42 | 85 | IPR001005 | - | |
Tpr1g3982 | 287 | PANTHER | PROTEIN REVEILLE 8 | 13 | 276 | - | - | |
Tpr1g3982 | 287 | Pfam | Myb-like DNA-binding domain | 40 | 85 | IPR001005 | - | |
Tpr1g3982 | 287 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 35 | 89 | IPR017930 | - | |
Tpr1g3982 | 287 | TIGRFAM | myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class | 38 | 87 | IPR006447 | GO:0003677 | |
Tpr1g3982 | 287 | Gene3D | - | 43 | 90 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr1g3982 | Tpr-Chr1 | 44640820 | 44644110 | Dispersed |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB-related | Tpr1g3982 | Myb_DNA-binding | 4.3e-11 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr1g3982 | - | - | gmx:100797466 | 432.565 |