Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3974 ATGGGTTGGATTCCATGTTATGGAAGTTCCAACACTAAGAAGAAGATAAAGAAATTGGAGGAAGTGAAGGATATGCGTGATGGGAACAAAGCCAACCCAGAGAAATTGAAGAAGAATTCATCTATCAATTCCAAAAATTCATCTAAAACTGGAGAGTCTGGACACATTGCTGCACAAACATTTCCTTTCCGTGAGTTAGCAACCGCTACTAGAAATTTTAGAGCAGAATGCCTTTTGGGTGAGGGAGGCTTTGGCAGAGTATACAAAGGGCATTTGGAAACTATTAATCAGACCGTTGCGATTAAGCAGCTTGACCGAAACGGGCTACAAGGGAATAGAGAATTCCTTGTTGAAGTGTTGATGCTGAGTCTTCTTCACCACCCTAACCTTGTCAACCTGATTGGCTATTGTGCTGATGGAGATCAAAGGCTTCTTGTTTATGAATATATGCCATTAGGATCCTTGGAAGACCACTTACATGATCTTTCTCCTGGCAAGAAACGACTTGACTGGAGCACGAGAATGAAAATAGCTGCTGGGGCTGCAAAGGGGTTAGAGTATCTACATGACAAAGCTAACCCTCCTGTCATATACCGAGATTTAAAGTGCTCCAACATTTTGCTTGGTAATGGGTATCATCCCAAGTTATCTGATTTTGGTTTGGCGAAAGTTGGTCCTGTGGGGGAAAACACTCATGTATCAACAAGGGTTATGGGAACCTATGGATATTGTGCTCCAGAGTATGCCATGACAGGTCAACTAACTCTGAAGTCAGATGTTTATAGCTTTGGCGTAGTTCTTCTGGAAATAATTACAGGAAGGAAAGCGATTGATAATTCAAAATGTGCAGCAGAGCGGAATCTTGTTGCATGGGCTAGACCATTGTTTAAAGATCGAAGAAAATTCACACAAATGGTTGATCCAATGCTCCAAGGTCAATATCCTTCAAGAGGGCTATACCAAGCCCTTGCTGTTGCAGCAATGTGTGTTCAGGAGCAGGCAAATATGCGTCCAGTTATAGCTGATGTTGTGACAGCTTTGAGTTACCTTGCTTCACAAAAATATCAGCCCAATACGCAGACTGTACAAAGCTCTCACCTCGCTCCTGGTACTCCTCCTACAACCAGGATGGGAGTTTGA 1140 0.4272 MGWIPCYGSSNTKKKIKKLEEVKDMRDGNKANPEKLKKNSSINSKNSSKTGESGHIAAQTFPFRELATATRNFRAECLLGEGGFGRVYKGHLETINQTVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLSPGKKRLDWSTRMKIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGNGYHPKLSDFGLAKVGPVGENTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNSKCAAERNLVAWARPLFKDRRKFTQMVDPMLQGQYPSRGLYQALAVAAMCVQEQANMRPVIADVVTALSYLASQKYQPNTQTVQSSHLAPGTPPTTRMGV* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3974 379 MobiDBLite consensus disorder prediction 22 54 - -
Tpr1g3974 379 Gene3D Phosphorylase Kinase; domain 1 41 149 - -
Tpr1g3974 379 ProSiteProfiles Protein kinase domain profile. 73 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3974 379 ProSitePatterns Serine/Threonine protein kinases active-site signature. 196 208 IPR008271 GO:0004672|GO:0006468
Tpr1g3974 379 ProSitePatterns Protein kinases ATP-binding region signature. 79 102 IPR017441 GO:0005524
Tpr1g3974 379 Pfam Protein tyrosine and serine/threonine kinase 77 346 IPR001245 GO:0004672|GO:0006468
Tpr1g3974 379 SUPERFAMILY Protein kinase-like (PK-like) 52 347 IPR011009 -
Tpr1g3974 379 PANTHER OS07G0668900 PROTEIN 1 376 - -
Tpr1g3974 379 CDD STKc_IRAK 79 347 - -
Tpr1g3974 379 SMART serkin_6 73 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3974 379 Gene3D Transferase(Phosphotransferase) domain 1 150 368 - -
Tpr1g3974 379 MobiDBLite consensus disorder prediction 360 379 - -
Tpr1g3974 379 PIRSF ILK 16 364 - -
Tpr1g3974 379 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL7-RELATED 1 376 - -
Tpr1g3974 379 MobiDBLite consensus disorder prediction 35 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3974 Tpr-Chr1 44487720 44492825 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3974 26 352 Glycoside Hydrolase AT3G07070 67.584 1.50e-166 470
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Tpr1g3974 PK_Tyr_Ser-Thr 1.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3974 - - gmx:100776041 652.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0011 1 128302 132738 Tpr1g3974 1 44487720 44492825 ECH
Tpr1g3974 1 44487720 44492825 Tpr1g3974 1 44487720 44492825 ECH