Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3957 ATGCAAATTCCATTTAACCCATTTCAATCATCACTCATATTCATCTTTCTCTTCTTTTTCTCTCATGGTACAAACGCTTTTGGCACCATGGGACCAATCTCAGCTTCATTTGGAGAATACGAATTGTTTTGTTCCATTGATGCAAGTGGTAAACAAGACGTTATTTGTTGGGGCAAAAACATTACTTCACCGCAACCTCTTTCTTCTTCCTCTTATGTTTCAAACATTCCTGCTATGTCAGCACTTTCTGGCGGTGAAGGTTTTCTCTGTGGCATTTTAGCAAACACTTCGCAGGCTTTTTGTTGGGCTGCTACTTCTAAACAAAACGCAGATCCCGTTTTGGTTCCACCGTCGTACCGGAACACTGCTTACTCCCACATCGCCGCCGGTAAGAATCATGTTTGTGCTGTTAGAGGATCTTACTACTCCGATCGTGATTCCGGAACTGTAGATTGTTGGCAAATCACGAAAAGAACTAAGAATGGAACTTTAATGGCGGTGCTTAATGATTCGTTTTCTGATCAATCGGTTACTAATCTTGAAATTAATCGGATTGTTTCCGGAGAAGGGTTTACTTGTGGTGGGGTTAGAGATGGAGGGTTAGTTTGTTGGGGACCCAATTCGGAAAATCTGAAAGTTTCCAATGTTTCTGATAGTTTTGCTGTTTTGGTTTCGGGGAGAACCGCAGTTTGCGGTGTTTCGAATGTCTCCGCCGATGTGAGATGTTGGGGTGATATAGAACCTCCGTCAACGGAGATTCGTTTTGTTTCACTCTCGGGCGGGGCACGCCATTTCTGCGGCGTTCGAGAGGATAATCACGTGGTTGAATGTTGGGGTAATTTGAATTCATCTTTGGTTCCAAAAGGTTATGGCTTTATGGCAATTGCTTCTTCTGATTATACAACTTGTGGTATAAGAGAAGATGATCTTCTTCTAGATTGTTGGTTGGTCAACGCTTCAAAGCCTGATTTTGACCCTCCTTTGGAGCTTTCAAGTCCTGGTCTTTGTAGGTCAAGTTCTTGTGAAGTTAATGAGTTTGATTTCAATGTTAGTGTTCTTAATGAACCAGATTTAACAAGTTTATGTGTTAGACAAGATTTGAGGATTTGTTCACCTTGTGGTTATAATTGTTCACAAGGATTCTTTTTGTCTAGTCCTTGTACTCAAAATTCTGATAGAGTTTGCACGGCTTGTTCTCTTTGTCAGAACAGTTCTTGTTTGAGTGTTTGTAAACTTCATTCTTCGAATGGATTTTTGCATTGGCATCATCTTCGTAGATGGGTTGTCATAATTGGATCTTCAGTTTTGTGTTTGTTGTTGATTTTGACTTGTGGGTGTATTTTTCGATGTTTGGTTTGTTCAAGGGGACAACGTAGGACAAAGAAACAATCCAAGTCATGTATTGGTAAACATGAACAAGAGGATGATGATGATGATGATGTGAATGGTAATGGTAACGGTCTTCTTCATTCGTCTTCTTCGGCTGCGTCTTGTCCTGGATTGCCTCAGGTTTTCAGGCTTTCGGAGTTGAAAGACGCTACCAATGGTTTCAAGGAGTTTAATGAGCTTGGGAGAGGAAGTTATGGATTTGTTTACAAAGCTGCTTTGGCGGATGGGAGAGTGGTTGCCGTGAAAAGAGCGAACGCTGCTACGATAATACACACCAACAATCGTGACTTCGAAATGGAGTTGGAAATTTTGTGCAAAATTCGTCATGTTAATATTGTTAACTTGCTGGGTTATTGTGCCGAGATGGGTGAGAGGTTACTTGTTTATGAGTATATGTCTCATGGGACACTATCTGATCACATTCATGGTGGTCTTTCTCCTCTTAATTGGAGCTTAAGGCTTAAGATAGCTATGCAATCTGCAAAGGGTGTAGAGTACCTTCACAAAGAACTGTTGCCTCCAATTGTTCATAAGGATCTCAAGAGTTCTAATATTCTTTTGGATTCAGAATGGGGGGCCAGAGTTTCCGACTTTGGACTTCTTACTTCGAGTGATAAAGATCTTAACGGCGACATGGAAAGTGATGTTTACAGCTTCGGGATTGTGTTGTTGGAAATTCTAAGTGGAAGGAAAGCTTTTGATAGAGATTTTGATCCACCTAATGTTGTTGAATGGGCAGTGCCTTTGATCAAACAAGGTAAGGCAGCTGCCATAATTGATCGCTATGTCGCTCTTCCGAGAAATGTCGAGCCTTTGCTTAAACTCAGCGATATAGCAGAGCTTGCTGTGAGAGAGAATCCGAGTGAGCGTCCATCTATGTCGGATATAGCATCTTGGTTGGAGCAAATTGTGAAGGATGGATTGATCTTATAA 2322 0.413 MQIPFNPFQSSLIFIFLFFFSHGTNAFGTMGPISASFGEYELFCSIDASGKQDVICWGKNITSPQPLSSSSYVSNIPAMSALSGGEGFLCGILANTSQAFCWAATSKQNADPVLVPPSYRNTAYSHIAAGKNHVCAVRGSYYSDRDSGTVDCWQITKRTKNGTLMAVLNDSFSDQSVTNLEINRIVSGEGFTCGGVRDGGLVCWGPNSENLKVSNVSDSFAVLVSGRTAVCGVSNVSADVRCWGDIEPPSTEIRFVSLSGGARHFCGVREDNHVVECWGNLNSSLVPKGYGFMAIASSDYTTCGIREDDLLLDCWLVNASKPDFDPPLELSSPGLCRSSSCEVNEFDFNVSVLNEPDLTSLCVRQDLRICSPCGYNCSQGFFLSSPCTQNSDRVCTACSLCQNSSCLSVCKLHSSNGFLHWHHLRRWVVIIGSSVLCLLLILTCGCIFRCLVCSRGQRRTKKQSKSCIGKHEQEDDDDDDVNGNGNGLLHSSSSAASCPGLPQVFRLSELKDATNGFKEFNELGRGSYGFVYKAALADGRVVAVKRANAATIIHTNNRDFEMELEILCKIRHVNIVNLLGYCAEMGERLLVYEYMSHGTLSDHIHGGLSPLNWSLRLKIAMQSAKGVEYLHKELLPPIVHKDLKSSNILLDSEWGARVSDFGLLTSSDKDLNGDMESDVYSFGIVLLEILSGRKAFDRDFDPPNVVEWAVPLIKQGKAAAIIDRYVALPRNVEPLLKLSDIAELAVRENPSERPSMSDIASWLEQIVKDGLIL* 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3957 773 SUPERFAMILY Protein kinase-like (PK-like) 494 764 IPR011009 -
Tpr1g3957 773 ProSiteProfiles TNFR/NGFR family cysteine-rich region domain profile. 340 395 IPR001368 GO:0005515
Tpr1g3957 773 ProSitePatterns Protein kinases ATP-binding region signature. 523 545 IPR017441 GO:0005524
Tpr1g3957 773 MobiDBLite consensus disorder prediction 464 483 - -
Tpr1g3957 773 Gene3D - 68 325 IPR009091 -
Tpr1g3957 773 PANTHER OS01G0750732 PROTEIN 30 771 - -
Tpr1g3957 773 ProSiteProfiles Protein kinase domain profile. 517 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3957 773 SMART serkin_6 517 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3957 773 Pfam Protein tyrosine and serine/threonine kinase 521 668 IPR001245 GO:0004672|GO:0006468
Tpr1g3957 773 Gene3D Phosphorylase Kinase; domain 1 490 594 - -
Tpr1g3957 773 Gene3D Transferase(Phosphotransferase) domain 1 595 672 - -
Tpr1g3957 773 Gene3D Transferase(Phosphotransferase) domain 1 673 770 - -
Tpr1g3957 773 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR1 30 771 - -
Tpr1g3957 773 ProSitePatterns Serine/Threonine protein kinases active-site signature. 638 650 IPR008271 GO:0004672|GO:0006468
Tpr1g3957 773 SUPERFAMILY RCC1/BLIP-II 33 282 IPR009091 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3957 Tpr-Chr1 44181261 44184196 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3957 24 767 Receptor kinase-like Gene Family AT3G59420 30.845 1.71e-108 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Tpr1g3957 PK_Tyr_Ser-Thr 1.8e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3957 - - gmx:100802259 1183.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3957 1 44181261 44184196 Tpr1g3957 1 44181261 44184196 ECH