Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3956 ATGGCATCCAACAGGGGTCAAGGAGGAATTCAACAGTTGTTGGCTGCTGAACAAGAAGCACAACGGATTGTGAATGCTGCGAAAAATGAAAAATCGGCTAGGTTGAAACAGGCCAAAGAAGAGGCTGAAAAGGAGATTGCTGAATACCGGGCTAAGCTTGAGGCTGAGTTTCAAAAGAAAGTCTCGGATAGTAGTGGTGATTCTGGAGCTAATGTCAAGCGACTTGACCAAGAAACCGAAGAAAAAATTCATCACCTGAAAACAGAGGCTGCAAGAATATCAGATGATGTTGTCGCTATGCTCCTGAAGTATGTAACAACTGTGAAAAAATAG 333 0.4294 MASNRGQGGIQQLLAAEQEAQRIVNAAKNEKSARLKQAKEEAEKEIAEYRAKLEAEFQKKVSDSSGDSGANVKRLDQETEEKIHHLKTEAARISDDVVAMLLKYVTTVKK* 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3956 110 Coils Coil 10 59 - -
Tpr1g3956 110 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 1 110 IPR005124 GO:0016471|GO:0046961|GO:1902600
Tpr1g3956 110 TIGRFAM V_ATP_synt_G: V-type ATPase, G subunit 3 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
Tpr1g3956 110 Pfam Vacuolar (H+)-ATPase G subunit 7 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
Tpr1g3956 110 PANTHER V-TYPE PROTON ATPASE SUBUNIT G1 1 110 - -
Tpr1g3956 110 Gene3D - 1 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3956 Tpr-Chr1 44142895 44145824 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3956 1 109 Primary Pumps ATPases(2) AT3G01390 74.312 3.16e-43 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3956 K02152 - gmx:100306550 190.274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3956 1 44142895 44145824 Tpr1g3956 1 44142895 44145824 ECH