Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3932 ATGTCTTCACAAGTTGTTTTCCAAACATTCTCTCAATCAGAAACCAAACCCTCCACCGTCTCCACCACCACCGTTGCCACCACCAGTTCTGATCCCAATGCTCAACTTACCACCGTCAAAAGAAAAACCTCCTCTCGTTCCACCAAAGACCGTCACACCAAAGTGAACGGCCGTGGCCGCCGTGTCCGTATGCCACCTCTCTGTGCTGCCAGAGTTTTCCAGCTGACACGTGAGTTAGGTCACCGTTCCGATGGTGAAACAATCGAGTGGCTTCTCCGACAAGCTGAACCGGCTATCATCGCTGTTACTGGTACCGGCACTGTCCCCGCCGGTCCGGTTTCAACAACCTCGCCGGCGTCTTCTTTCTCCAGGCCGTCTGTGTCCTGCAATGTTGCTCCGCCGGTGTCATCTGTTGGTCCCAGCGGTGGTGGAATGTTTGCTGCTGCTGCTCTCCCGCTACAGCAGCCGAGTTGCCGGCTTGATCTATGTCCGCCGTCTGGAATGGAGTATGCTGTACCGAATCGGTACCATCATATGCCGTTCACGGCGTTGCTGTTGCAACCGAGTTCGGTGGAGGAGAATCAGCAAGAAGAATCTCTGAGCATTAACGAACAATGA 618 0.5421 MSSQVVFQTFSQSETKPSTVSTTTVATTSSDPNAQLTTVKRKTSSRSTKDRHTKVNGRGRRVRMPPLCAARVFQLTRELGHRSDGETIEWLLRQAEPAIIAVTGTGTVPAGPVSTTSPASSFSRPSVSCNVAPPVSSVGPSGGGMFAAAALPLQQPSCRLDLCPPSGMEYAVPNRYHHMPFTALLLQPSSVEENQQEESLSINEQ* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3932 205 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 13 128 IPR005333 GO:0003700
Tpr1g3932 205 Pfam TCP family transcription factor 47 128 IPR017887 -
Tpr1g3932 205 PANTHER TRANSCRIPTION FACTOR TCP14 13 128 - -
Tpr1g3932 205 ProSiteProfiles TCP domain profile. 48 102 IPR017887 -
Tpr1g3932 205 MobiDBLite consensus disorder prediction 1 58 - -
Tpr1g3932 205 MobiDBLite consensus disorder prediction 1 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3932 Tpr-Chr1 43558797 43559888 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3932 5 188 TCP Transcription Factor Family AT2G37000 45.109 1.01e-43 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Tpr1g3932 TCP 5.5e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3932 - - cam:101510590 251.906