Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3927 ATGGGTTTAGGTTTCGCTATTGGATTCATCGGTGTTCTCATTCTATTTCACGCCGCTTATTCAACCATCCAATATAGGACTTTGTTGAAGATTACAGAAGAAGAGTTTTCTGGATCTCCTTTGAATGTTGTGATTGAACTGTCTTTAGGATTATTGCTTTGTACTTGGGCTGCTTTGACTGTGCCAGGGAAGTTTTTGTGCATCCTCCCTCATTCTGAAGAGAATAGGATTTTACTACTATCAGAGCCATTTATTTATGATGAGGTGGGAACAAGAACAATGTGA 285 0.3895 MGLGFAIGFIGVLILFHAAYSTIQYRTLLKITEEEFSGSPLNVVIELSLGLLLCTWAALTVPGKFLCILPHSEENRILLLSEPFIYDEVGTRTM* 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3927 94 PANTHER - 3 76 - -
Tpr1g3927 94 PANTHER MEMBRANE MAGNESIUM TRANSPORTER 1 3 76 - -
Tpr1g3927 94 Pfam Membrane magnesium transporter 9 59 IPR018937 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3927 Tpr-Chr1 43459640 43464455 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3927 K23566 - gmx:100305468 136.346
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3927 1 43459640 43464455 Tpr1g3927 1 43459640 43464455 ECH
Tpr6g0890 6 7774290 7777816 Tpr1g3927 1 43459640 43464455 PCT