Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3924 ATGCACTTGAGCGAGAACGAAGGAATAGAGGGGAAGACCTTTGTGGTGACGGGTGGACTCGGATTCGTAGGATCTGCTCTGTGCTTGGAACTCATAAGAAGAGGTGCTGAAGAGGTGCGAGCCTTTGACCTCCGCCAATCTTCTCCTTGGTCGCATGTTCTTAATGAGAAGGGAGTCAACTGCATACAAGGGGATGTTGCCTGCAAAGAGGATGTTGAAATGGCACTCCGTGGTGCTGAATGTGTATTTCACCTTGCGGCCTTTGGAATGTCAGGAAAAGAGATGCTGCAATTCGGTCGAGTTGATGAAGTCAATATAAATGGGACTTGCCATGTTCTGGACGCTTGCCTTGACCTCGGCATCAAAAGGCTTGTCTATTGTAGCACATACAACGTTGTCTTTGGAGGTCAAAAGATCCTCAATGGAAATGAGACCTTGCCTTATTTCCCAATTGACCGCCATGTTGATCCATATGGCCGCAGTAAATCAATCGCTGAACAGTTGGTACTAAAGAATAATGCCCGCCCTCTCAAGAATGACACCGGGGACCGTCTTTACACCTGTGCTGTTCGTCCAGCTGCAATCTATGGGCCGGGGGAAGACAGGCACCTTCCAAGGATCATAACCATGGCTAGGTTGGGTTTGCTTCTGTTCAGAATTGGCGAGAAAACTGTAAAGTCGGATTGGGTTTATGTGGATAACCTTGTCCTTGCTCTTATACTGGCAAGTATGGGACTTTTGGATGACAGCAATAACAAGGGAAAGCAACCTATAGCTGCTGGCCAGACATACTTTATATGTGACGGTTCACCTATCAATTCTTTTGAATTCCTTCAACCTTTACTCAGGAGTTTGGATTATGAACTACCCAAAACATCTTTAGCTGTCGAACATGCTCTTGTTCTTGGGAGGATTTGCCAGGGTGTTTATACAATCTTATATCCATGGCTTAATCGGCGGTGGCTGCCTCAACCATTCATCCTTCCGAGTGAAGTACACAAGGTGGGAGTGACCCACTATTTCTCTTATCTTAAAGCCAAAGAAGAGATTGGCTATGTTCCCATGGTGACCTCGCGAGAGGGAATGGATTCTACCATATCTTACTGGAAACAGAGGAAAAGGCAAATTCTGGATGGGCCTACCATCTATACCTGGCTGTTTTGTGTCTTTGGAATGACCTCACTCTTTTGTGCTGCTTTCCTACCAGACATAGGGATTGTGTTTCTTCTCAGAGCTATATCTCTATTTGTCTTTCGGTCAACGTGGATGACAAGGCTGGTATTTTTTCTAGCGACAGCTGCACATGCCATTGAGGCCATTTATGCTTGGTACCTGGCTAAAAGCGTGGATCCTGCCAATGCAAGAAGCTGGTTTTGGCAAACATTTGCTCTGGGGTTCTTTTCATTGCGTTTTCTGTTGAAAAGAGCAAGGAAATAA 1437 0.4579 MHLSENEGIEGKTFVVTGGLGFVGSALCLELIRRGAEEVRAFDLRQSSPWSHVLNEKGVNCIQGDVACKEDVEMALRGAECVFHLAAFGMSGKEMLQFGRVDEVNINGTCHVLDACLDLGIKRLVYCSTYNVVFGGQKILNGNETLPYFPIDRHVDPYGRSKSIAEQLVLKNNARPLKNDTGDRLYTCAVRPAAIYGPGEDRHLPRIITMARLGLLLFRIGEKTVKSDWVYVDNLVLALILASMGLLDDSNNKGKQPIAAGQTYFICDGSPINSFEFLQPLLRSLDYELPKTSLAVEHALVLGRICQGVYTILYPWLNRRWLPQPFILPSEVHKVGVTHYFSYLKAKEEIGYVPMVTSREGMDSTISYWKQRKRQILDGPTIYTWLFCVFGMTSLFCAAFLPDIGIVFLLRAISLFVFRSTWMTRLVFFLATAAHAIEAIYAWYLAKSVDPANARSWFWQTFALGFFSLRFLLKRARK* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3924 478 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 15 295 IPR002225 GO:0003854|GO:0006694|GO:0016616
Tpr1g3924 478 Gene3D - 3 375 - -
Tpr1g3924 478 Pfam Transmembrane protein 254 387 473 IPR028110 -
Tpr1g3924 478 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 9 360 - -
Tpr1g3924 478 PANTHER SHORT-CHAIN DEHYDROGENASE/REDUCTASE FAMILY 42E MEMBER 1 9 360 - -
Tpr1g3924 478 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 9 378 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3924 Tpr-Chr1 43363129 43366758 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3924 1 478 Lipid Metabolism Gene Families AT2G33630 68.619 0.0 704
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3924 - - gmx:100784676 820.076
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3924 1 43363129 43366758 Tpr7g0179 7 1472194 1476675 PCT