Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3923 ATGGTGTCGCTTCAACCAGTGACTTGCCGTTCTTCTTCTTCTTGTTTCGTTACTGGCTCTCTTCAGTGTTGTCGCTCCCTCTCCGCAAGCTTTGCCCCAAAACCAAGAAAACATCCTCCTCCTCCTCGTCTTTTCATCTGCAAAGCCTCATGGCAAGAGCTTGCTGGAGTTTTAGTATTCTCAGCGATTCCATTCACTGCCGTCAAAGCTATAGCTAATAGTCCGCTAGGGGAGTCGCTTCAGAGGAAAATGGAAGAGACAAAGAAATTTGCTATACAAAACTCCTCTAAATTCAAGGCTGAGGCTCACAAGGCCAGGAAACAGAGCTTTTGGTATGGAGAAGGTCGGCCTCGTTGGCTCGGTCCTATTTCATATGGCTACCCATCATATCTCATTGGGGAACTTCCCGGTGATTATGGCTTTGACATTGCTGCCCTTGCCAAGGATCCTGTGGCACTGGACAAATATTTCAACTTTGAGATATTGCATGCTCGCTGGGCTATGCTTGCATCTGTTGGTGCTCTCATTCCTGAGTTGCTAGACCTATTGGGAGCCTTTCACTTTGTAGAACCTGTTTGGTGGCGGGTTGGTTATTCAAAGCTCCAGGGAGATACTCTCGATTACCTTGGCATCCCAGGTCTTCACTTGGCTGGAAGCCAGGGGGTGGTTGTGATTGCTATTTGCCAAGCACTCCTTATGGTTGGACCAGAATACGCTAGATATTGTGGGATTGAGGCATTGGAGCCTCTAGGAATATATCTGCCCGGTGATATAAACTACCCTGGAGGAGCATTATTTGATCCCTTAAATCTGTCCAAAGATCCTGAAGCATTTGAAGAGCTAAAGGTGAAAGAAATAAAAAATGGACGCTTGGCAATGGTGGCTTGGTTAGGCTTCTTCATGCAAGCGGCACTGACGGGTAAAGGTCCTGTACAGAACATTATGGATCACATCTCCGATCCTTTCCACAACAACTTGCTGGGGTTACTCAATTCAATGAAATTACACTAG 1011 0.4659 MVSLQPVTCRSSSSCFVTGSLQCCRSLSASFAPKPRKHPPPPRLFICKASWQELAGVLVFSAIPFTAVKAIANSPLGESLQRKMEETKKFAIQNSSKFKAEAHKARKQSFWYGEGRPRWLGPISYGYPSYLIGELPGDYGFDIAALAKDPVALDKYFNFEILHARWAMLASVGALIPELLDLLGAFHFVEPVWWRVGYSKLQGDTLDYLGIPGLHLAGSQGVVVIAICQALLMVGPEYARYCGIEALEPLGIYLPGDINYPGGALFDPLNLSKDPEAFEELKVKEIKNGRLAMVAWLGFFMQAALTGKGPVQNIMDHISDPFHNNLLGLLNSMKLH* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3923 336 Pfam Chlorophyll A-B binding protein 128 303 IPR022796 -
Tpr1g3923 336 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 48 326 IPR001344 GO:0009765|GO:0016020
Tpr1g3923 336 Gene3D Chlorophyll a/b binding protein domain 118 329 - -
Tpr1g3923 336 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 7, CHLOROPLASTIC 48 326 - -
Tpr1g3923 336 SUPERFAMILY Chlorophyll a-b binding protein 110 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3923 Tpr-Chr1 43356056 43361006 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3923 46 332 Chloroplast and Mitochondria Gene Families AT1G76570 79.094 4.27e-176 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3923 K14172 - gmx:100786260 538.11