Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3916 ATGGCTGCATTGAATATTAGTTACTTGGTGGTGGTGGAGTTATTGTGTGTGTTGGCCATCATCACTACTACTACTGTTGCTGAAGATCCATACAGGTTCTTCAACTGGAATGTTACATACGGCGACATTTATCCACTTGGTGCTCGCCAACAGGGAATACTTATCAATGGCCAATTCCCAGGTCCTGACATTCATTCTGTTACAAATGACAATCTCATTATCAATGTCTTCAACAGCTTGGACGAGCCTTTTCTCATCTCCTGGAACGGAGTCCAGCAGAGAAGGAACTCATACGAAGATGGAGTGTTTGGAACAACATGTCCCATTCCCCCTGGAAAGAACTTCACATACATACTTCAAGTGAAGGATCAAATTGGTAGCTTCTACTATTTCCCATCCCTTGCATTCCACAAAGCTGCTGGTGGTTTTGGAGGCATTAGGATTCTAAGTAGGCCAAGAATTCCAGTTCCCTTTGATGATCCCGCCGGTGATTATACCGTCCTTATCGGAGATTGGTACCAGTCCAACCACACAGATTTGAAGGCCCAACTTGATAATGGTAAGAAGTTGCCTTTCCCTGATGGAATCCTTATCAATGGTCGTGGTTCTGGAGGAGCATCTTTCAATGTGGAGCAAGGAAAGACTTACAGGCTTAGAATATCAAATGTGGGGTTACAAAATTCACTCAACTTTCGCATACAAAACCACAAGTTAAAGTTGGTAGAAGTGGAAGGAACACACACCCTCCAAACCACTTACTCATCCCTTGATGTTCACGTGGGTCAATCATACTCAGTTCTAGTAACAGCAGATCAACCTGGTCAAGACTATTACATTGTTGTTTCCTCTCGATTTACCACTCCAGTACTCACCACCACCGGAGTTCTTCGCTACAGCAACTCTGCCGGCCCAGTATCAGGCCCACCCCCTGGTGGACCCACAATCCAAATTGACTGGTCTTTGAACCAGGCCCGTTCCATCAGGACAAACCTTACAGCAAGTGGACCAAGGCCAAACCCGCAAGGATCATACCATTATGGCATGATAAACACAACGAGGACAATTGTACTTTCAAGTTCAGCTGGTCAAGTCAGTGGGAAGCAAAGATATGCAATTAACAGCGTGTCTTATGTTTCCCCCGACACTCCTCTTAAGCTGGCTGACTTCTTCCAGATATCAGGTGTTTACCGTCCTGGAAGCATCTCTGATAGACCCACTGGTGGTGGTATATACACTGACACTTCTGTTCTTCAAACTGACTACAGAACATTTGTAGAGATTGTTTTCCAAAATGATGAAGACATCCTTCAGAGCTATCATCTTGATGGCTACTCTTTCTTTGTTGTTGGTATGGATGGAGGACAATGGACAAGTGATAGCAGGAACCAGTACAATCTTAGAGATGCAGTTTCCCGTAGCACCACTCAGGTATATCCCAAGTCATGGACTGCTATATATGTTGCGCTCGACAATGTGGGAATATGGAACTTGAGGTCTGAATTTTGGGCACGACAGTACCTTGGACAACAGTTTTATATGCGTGTATATACAACATCAACCTCACTCAGAGATGAATACCCTGTTCCTAAGAATGCACTACTTTGTGGTAGAGCAGCTGGAAGACATACTCGACCCCTTTAA 1641 0.4449 MAALNISYLVVVELLCVLAIITTTTVAEDPYRFFNWNVTYGDIYPLGARQQGILINGQFPGPDIHSVTNDNLIINVFNSLDEPFLISWNGVQQRRNSYEDGVFGTTCPIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRILSRPRIPVPFDDPAGDYTVLIGDWYQSNHTDLKAQLDNGKKLPFPDGILINGRGSGGASFNVEQGKTYRLRISNVGLQNSLNFRIQNHKLKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPGQDYYIVVSSRFTTPVLTTTGVLRYSNSAGPVSGPPPGGPTIQIDWSLNQARSIRTNLTASGPRPNPQGSYHYGMINTTRTIVLSSSAGQVSGKQRYAINSVSYVSPDTPLKLADFFQISGVYRPGSISDRPTGGGIYTDTSVLQTDYRTFVEIVFQNDEDILQSYHLDGYSFFVVGMDGGQWTSDSRNQYNLRDAVSRSTTQVYPKSWTAIYVALDNVGIWNLRSEFWARQYLGQQFYMRVYTTSTSLRDEYPVPKNALLCGRAAGRHTRPL* 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3916 546 Pfam Multicopper oxidase 164 300 IPR001117 -
Tpr1g3916 546 PANTHER - 12 539 - -
Tpr1g3916 546 SUPERFAMILY Cupredoxins 24 178 IPR008972 -
Tpr1g3916 546 Pfam Multicopper oxidase 38 151 IPR011707 GO:0005507
Tpr1g3916 546 Gene3D - 31 152 IPR008972 -
Tpr1g3916 546 CDD CuRO_1_AAO_like_1 33 148 IPR034273 GO:0005507
Tpr1g3916 546 Gene3D - 347 542 IPR008972 -
Tpr1g3916 546 SUPERFAMILY Cupredoxins 348 537 IPR008972 -
Tpr1g3916 546 SUPERFAMILY Cupredoxins 158 338 IPR008972 -
Tpr1g3916 546 Gene3D - 161 336 IPR008972 -
Tpr1g3916 546 PANTHER MULTI-COPPER OXIDASE 12 539 IPR045087 -
Tpr1g3916 546 Pfam Multicopper oxidase 382 518 IPR011706 GO:0005507|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3916 Tpr-Chr1 43282254 43286118 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3916 - - gmx:100812416 988.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3916 1 43282254 43286118 Tpr1g3916 1 43282254 43286118 ECH
Tpr1g3916 1 43282254 43286118 Tpr7g0183 7 1502657 1512243 PCT