Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3915 ATGGAGAAATCAGAGTCGGGGCAAGTCGCAAGCGAGTTAGAAGAAGTGGTTAAGTCTCTTCCTTCCGACGCCGTCAACCACTTGTTCTCCCTCGGGTTATGTGTGCGGTGCATCTTTCGTGTGTTTGGTGTGGAAGCCACCACCGTCTATGCAGCAGCATCTCCTTCACTATCACACTCCATATTCCCTTCCATTGTTGCTCAGCAACATCAACCAACAGATGATAAACAACTCTGCACCCTCTGCTTAGGGATCCTTCAGTTTAGATTTCATCGCAACGACGACAACAACAACAACGATGTCCCTCTTCTCATTTCTCAAATGGTTAAACGCGAGGGCTATCACTGTGATTCCTTTTCCCTCGAAGTTTCCATTCCTCCTATTATCCTTCACAACGATAACTATCTTCGCTCCTACATGAAAATCAAATATGGATCTCAACCTTGGTTTCAAGACACATGCATCTCTACAAAGGATGCCTTGAAATTTTCTCTACTGGATCCTCTTCAAAATCTCCTGGAATGTAAATCAAGTGTGGGTTCTTTACGCATTCGTTTGACATACACTGCATCAAAAGAGGCAGACAAATTCTCTGATAATGCTGACACTTCTAAGAGAAGAAAAACAGATGAATGCAATTTAGTTGGACAAAAGTCTATCAGCAGTTCGCTAGAAAGCGAATCCTCTGATTGCTGTAAATTCTTGCTGGAAATGGCAAATGAACCTTGCCATTTTACTTACCTTTGCTGCAGAACACCTATATATTTTGGTGGAAGATACCTGAAGTATTCACGGAATGTGAGTCAAACACGTTGGATCATTGATGATGAAAGAATGGGGGAAGCATCAGTTGAGGAAATAATCGGTGGAAACATCCTCCAAGTATGCCAAGCTGATAGTTTCAAGTTTCATGCTGCCGGAAGAGAAGATATTGATGTCCGAATGCTGGGCCCAGGCAGGCCATTTCTTGTTGAGGTGCAAAATGCACGACAAGTCCCATCTGAATTGTTTGTTAAAAATATAGAGAAAAAGATAAATACCATGGAGAATAAATTGGTTAGAGTGAAAAATCTGAAACTTGTTGGCAGTCATGGCTGGGACCTTATGCGTGAAGGCGAAGCTGAGAAGCAGAAGCAATATGCTGCTTTAGTGTGGATTTCTCGACCTCTGACGGATGAAGATTTTCAACATGTGTCTTCAGTCAAGGATTTGAAAGTTTTGCAAAGGACCCCTATCAGGGTGCTACACCGTCGCAGTCCTTTAGAGCGTGAAAAAATCATTCATTGGATGAAAATAGAGACAATTGCTGGAAGTTCCCAATATTTTCTTTTGCATCTATGTACACAGGCCGGGACCTACATCAAGGAATTCGTTCATGGGGATCTTGGACGCACGCATCCTAGCGTTGGATCTATGTTCGGTTGTAGAGCTGAAATTTTGCAACTTGATGTGACGGACATCAAAATGGAATGTTTCCTGACTTAA 1485 0.4256 MEKSESGQVASELEEVVKSLPSDAVNHLFSLGLCVRCIFRVFGVEATTVYAAASPSLSHSIFPSIVAQQHQPTDDKQLCTLCLGILQFRFHRNDDNNNNDVPLLISQMVKREGYHCDSFSLEVSIPPIILHNDNYLRSYMKIKYGSQPWFQDTCISTKDALKFSLLDPLQNLLECKSSVGSLRIRLTYTASKEADKFSDNADTSKRRKTDECNLVGQKSISSSLESESSDCCKFLLEMANEPCHFTYLCCRTPIYFGGRYLKYSRNVSQTRWIIDDERMGEASVEEIIGGNILQVCQADSFKFHAAGREDIDVRMLGPGRPFLVEVQNARQVPSELFVKNIEKKINTMENKLVRVKNLKLVGSHGWDLMREGEAEKQKQYAALVWISRPLTDEDFQHVSSVKDLKVLQRTPIRVLHRRSPLEREKIIHWMKIETIAGSSQYFLLHLCTQAGTYIKEFVHGDLGRTHPSVGSMFGCRAEILQLDVTDIKMECFLT* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3915 494 Gene3D - 378 488 - -
Tpr1g3915 494 SUPERFAMILY Pseudouridine synthase 374 488 IPR020103 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Tpr1g3915 494 Coils Coil 338 358 - -
Tpr1g3915 494 Gene3D - 253 377 - -
Tpr1g3915 494 PANTHER UNCHARACTERIZED 9 489 IPR039894 -
Tpr1g3915 494 PANTHER BNAC07G15400D PROTEIN 9 489 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3915 K07583 - gmx:100780683 715.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3915 1 43275885 43281851 Tpr1g3915 1 43275885 43281851 ECH