Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3912 ATGGTGGGAGATACAGAGAGTTGCAACGGTAGAGCTTGTGGATGGAATTATGGTCGGATTGAGAGTCTAAAAGTTGAAGTTTACAACGAGATTCTGAATCGACTCAGAGAATTGAATATCCCAGATGTCACTCTTCCTTATTTTGAAGATGAGCTTTGGCTTCACTTCAATACCCTTCCAACTAGGTATGCACTGGAAATGAATGTTCAGAAGGCGCAAGATGTTCTTATGCATAAAAATTTACAAAATATGGCACGAAGACGAACTATTGCTAGTAGACCTGCAATTGAAGTCCGCCTCCTCCAGGTTCATTCTGCTTCTGGTGTGCATTCTAGCAAATCAATTAATTCCAACTTACAGAAAGAAATCAATCTCCAAGACACTGATTTTCCATGCAACATGAGATCAATGCATGAAATCACAATTTCAACCAGCGATAAGCCAAAACTTTTCAGTCAGTTGACCACCTTACTCTCTGAGATTGGGCTGAATATTCAAGAAGCACATGCCTTTTCCACATTGGATGGATATTCATTAGATGTTTTTGTTGTTGATGGTTGGGAAGGCCAGGATACTGAGAGACTCAAGCATGAAGTGACAAAGAAAATGCAGAAACTCGAGGAAGATCAATGGTTCCCCCTGCTTCCTTTTCCTAAGCCCTGGTGCAGTCTTCCTAAGGAGAAACCAGAGAAAATTTGGATGAACTATATCTCAAACCATGTAAACAAACCCATCAGTAGAAATTATGTGTGGGAAATTGATGCAAGCTGTTTAAGATATGAGAAGAAGATTGGCTCTGGATCAGTCAGTGATTTGTACAAAGGCACTTACATTAATAAAGATGTGGCTATCAAAGTATTTAAGAATGGTAGTAGAAATGAAAATATGCAGAGGGAGTTTTCTCAGGAAATATTTATCACGAGTAAAATTCAGCATAAGAATGTTATCAAATTTATTGGTGCCTGTCCAAAACCAAACTTTCATCTTGTCACAGAATATATGTCTGGTGGAAATATGTATGACTTTCTGCATATACAGAAGGTCGTACTTACTCTTCCTTCTTTGCTCAAAATAGCAATTGATGTCTCCCAAGGAGTGAATTATTTGCACAAAAACAACATTATACATCGAGACCTCAAAACTGCAAATCTTTTGATGGATGAGAAAGGGGTAGTCAAAGTTGCTGATTTTGGTGTAGCCAGATTGCAAAATCAATCTGGTATAATGACTGCAGAAACTGGAACATACCGATGGATGGCTCCAGAGGTTATTCAACATAAGCCATATAACCACAAAGCTGATGTTTTCAGCTTTGGGATTATTCTTTGGGAGCTGCTCACAAGAAAGCTTCCCTATGAAGATTTATCCCCATTGCAAGCAGCAATTGGAGTAGTACATAAGGATTTGAGGCCTGAAATCCCAAGGGATACTCATCCAAAGTTAGTGGAATTGATTCACCGGTGCTGGCATAAAGATCCGTGTTTAAGGCCTGATTTCTCAGAAATTATCAAGTTTCTGCAGCACATTAACATGATGATAGCAGTGAAGAAGAAGAAGGTTAAGGTTAAGGCTAAGGGAATGCATGAGCACGACTAG 1596 0.391 MVGDTESCNGRACGWNYGRIESLKVEVYNEILNRLRELNIPDVTLPYFEDELWLHFNTLPTRYALEMNVQKAQDVLMHKNLQNMARRRTIASRPAIEVRLLQVHSASGVHSSKSINSNLQKEINLQDTDFPCNMRSMHEITISTSDKPKLFSQLTTLLSEIGLNIQEAHAFSTLDGYSLDVFVVDGWEGQDTERLKHEVTKKMQKLEEDQWFPLLPFPKPWCSLPKEKPEKIWMNYISNHVNKPISRNYVWEIDASCLRYEKKIGSGSVSDLYKGTYINKDVAIKVFKNGSRNENMQREFSQEIFITSKIQHKNVIKFIGACPKPNFHLVTEYMSGGNMYDFLHIQKVVLTLPSLLKIAIDVSQGVNYLHKNNIIHRDLKTANLLMDEKGVVKVADFGVARLQNQSGIMTAETGTYRWMAPEVIQHKPYNHKADVFSFGIILWELLTRKLPYEDLSPLQAAIGVVHKDLRPEIPRDTHPKLVELIHRCWHKDPCLRPDFSEIIKFLQHINMMIAVKKKKVKVKAKGMHEHD* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3912 531 Gene3D Transferase(Phosphotransferase) domain 1 336 530 - -
Tpr1g3912 531 SMART serkin_6 258 511 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3912 531 PRINTS Tyrosine kinase catalytic domain signature 331 344 IPR001245 GO:0004672|GO:0006468
Tpr1g3912 531 PRINTS Tyrosine kinase catalytic domain signature 368 386 IPR001245 GO:0004672|GO:0006468
Tpr1g3912 531 PRINTS Tyrosine kinase catalytic domain signature 414 424 IPR001245 GO:0004672|GO:0006468
Tpr1g3912 531 PRINTS Tyrosine kinase catalytic domain signature 433 455 IPR001245 GO:0004672|GO:0006468
Tpr1g3912 531 PRINTS Tyrosine kinase catalytic domain signature 477 499 IPR001245 GO:0004672|GO:0006468
Tpr1g3912 531 SUPERFAMILY ACT-like 134 208 IPR045865 -
Tpr1g3912 531 ProSiteProfiles Protein kinase domain profile. 258 511 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3912 531 Pfam Protein tyrosine and serine/threonine kinase 259 506 IPR001245 GO:0004672|GO:0006468
Tpr1g3912 531 Coils Coil 189 209 - -
Tpr1g3912 531 CDD STKc_MAP3K-like 264 506 - -
Tpr1g3912 531 ProSiteProfiles ACT domain profile. 139 217 IPR002912 -
Tpr1g3912 531 Gene3D Phosphorylase Kinase; domain 1 249 335 - -
Tpr1g3912 531 PANTHER ACT-LIKE TYROSINE KINASE FAMILY PROTEIN 8 103 - -
Tpr1g3912 531 PANTHER ACT-LIKE TYROSINE KINASE FAMILY PROTEIN 103 509 - -
Tpr1g3912 531 ProSitePatterns Serine/Threonine protein kinases active-site signature. 374 386 IPR008271 GO:0004672|GO:0006468
Tpr1g3912 531 SUPERFAMILY Protein kinase-like (PK-like) 233 506 IPR011009 -
Tpr1g3912 531 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 8 103 - -
Tpr1g3912 531 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 103 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3912 Tpr-Chr1 43215664 43223234 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3912 4 509 MAP Kinase Kinase Kinase AT2G17700 51.661 0.0 533
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Tpr1g3912 PK_Tyr_Ser-Thr 1.4e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3912 - - mtr:MTR_1g026160 705.671