Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3911 ATGGCGACGCCACCGCCAGCAGTTAAAGTGTACGGACCAGCTTTGTCCACCGCCGTTTCAAGAGTGCTGGCATGTCTCAACGAGAAAGACATCCCATTTCAACTCATCCCTCTCAACATGTCCAAAGGAGAACACAAAAACCCTCATTTCCTCAAAATCCATCCCTTTGGTCAAGTACCTGCATTTCAAGATGACCACATTTCTCTGTTTGAGTCGAGAGCGATATGCCGGTACGTTTGCGAGAAACACGGAGGAGAGAAAGGAAACAAACAACTGTACGGTACCAATCCACTTGCAAAGGCTTCCATAGATCAATGGTTGGAGGCTGAAGGACAGAGCTTCAATCCACCATCTTCAACTCTGGTGTTTCAGCTAGCATTCGCTCCTCGAATGAAGATCAAGCAAGACGAAGGAGCAATCAGACAGAATAAAGAAAAGCTTAAGAAAGTGCTTGATGTGTACGATAAGAGGCTTGCTGAAACTCGCTACTTGGCCGGTGATGAATTCACACTCGCTGACCTTTCCCATCTTCCCAATATTCATTACTTGGTCTCTTCTTCTGATCATGAAGACACGGCTGCTCTGTTTACTTCTGAGAGAGAAAACGTGTCCAGGTGGTGGACGGAGATCTCCACGCGTCAGTCATGGAAGAATGTCATCGATTTGTACCCAAAACCTTGA 681 0.4655 MATPPPAVKVYGPALSTAVSRVLACLNEKDIPFQLIPLNMSKGEHKNPHFLKIHPFGQVPAFQDDHISLFESRAICRYVCEKHGGEKGNKQLYGTNPLAKASIDQWLEAEGQSFNPPSSTLVFQLAFAPRMKIKQDEGAIRQNKEKLKKVLDVYDKRLAETRYLAGDEFTLADLSHLPNIHYLVSSSDHEDTAALFTSERENVSRWWTEISTRQSWKNVIDLYPKP* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3911 226 SUPERFAMILY Thioredoxin-like 5 86 IPR036249 -
Tpr1g3911 226 Gene3D - 95 220 - -
Tpr1g3911 226 CDD GST_N_Phi 7 82 - -
Tpr1g3911 226 SFLD Glutathione Transferase (cytosolic) 7 221 IPR040079 -
Tpr1g3911 226 PANTHER GLUTATHIONE S-TRANSFERASE RHO 7 220 - -
Tpr1g3911 226 Pfam Glutathione S-transferase, N-terminal domain 8 79 IPR004045 -
Tpr1g3911 226 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 87 IPR004045 -
Tpr1g3911 226 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 96 226 IPR010987 -
Tpr1g3911 226 Pfam Glutathione S-transferase, C-terminal domain 120 213 IPR004046 -
Tpr1g3911 226 Gene3D Glutaredoxin 7 89 - -
Tpr1g3911 226 SUPERFAMILY GST C-terminal domain-like 89 221 IPR036282 -
Tpr1g3911 226 SFLD Main.5: Phi-like 7 221 - -
Tpr1g3911 226 CDD GST_C_Phi 98 220 IPR034347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3911 Tpr-Chr1 43212140 43213319 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3911 10 222 Glutathione S-transferase Gene Family AT2G47730 47.418 4.89e-63 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3911 K00799 - zju:107422694 341.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3911 1 43212140 43213319 Tpr1g3911 1 43212140 43213319 ECH