Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3909 ATGGAAAAAGATAAACAGAGCAAGCTGAGGAACAAGTTCTTGAAAGCAGCAGCTGCAATCACGGTAACATTTCAAAACGGTCCTTTCAGTCCAGGAAGGGATCACAAATTTAGATCAGACAATAACACAAACAGGTGGGGTGCAAAAACTCATGCTGCCAAAGGATTCTCTGGACCTGTCGTTACTATGATTCCGTACGAAGCTAGAAGAAAACCTAAAGATGGTACTACCACTGAAACACAAGAACCCACTTCACCCAAGATTTCTTGTATGGGTCAGATCAAGCATCACAAGAAGAAACATATTGTAAAAAACAATATTCCACTTCCCAGACAAACCGATGCTTCTACTCCAAAAGACGCGGAGGTGAAGAAATCTAAGTTTCAGAGGATATTTTCACACAGATCCAAATCCAAATTCATGGAAAGAAAATCGGATGGTAATTCTGGGTTTGTCAGTGAAGGGAAGAACGCCCCGCCTATGGGTGATATGAGGCGATTCGCAAGCAGTCGCGAAGCTTTTTCTAATTTCGATTGGAAAGCTGTGATAGAGCCTGAAGAAATTGATCAAAGGGATTGTTTTACTGATGGAGAAGATGATGAGATCTTGATTCCATTTTCTGCACCTATTTTGGTTGGTGGTGGTGATACAACAACATCATCATCTAATTTGAAGTTTAAGCCAAGGAATGAGATTAATCTTTGGAAGAGAAGAACAATGGCACCACCTAGGCCTCTTCAGTTGAATCCTGTGCTTAAGGCTAAATAA 768 0.4089 MEKDKQSKLRNKFLKAAAAITVTFQNGPFSPGRDHKFRSDNNTNRWGAKTHAAKGFSGPVVTMIPYEARRKPKDGTTTETQEPTSPKISCMGQIKHHKKKHIVKNNIPLPRQTDASTPKDAEVKKSKFQRIFSHRSKSKFMERKSDGNSGFVSEGKNAPPMGDMRRFASSREAFSNFDWKAVIEPEEIDQRDCFTDGEDDEILIPFSAPILVGGGDTTTSSSNLKFKPRNEINLWKRRTMAPPRPLQLNPVLKAK* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3909 255 PANTHER OS09G0542900 PROTEIN 1 249 - -
Tpr1g3909 255 MobiDBLite consensus disorder prediction 137 158 - -
Tpr1g3909 255 MobiDBLite consensus disorder prediction 68 88 - -
Tpr1g3909 255 MobiDBLite consensus disorder prediction 26 54 - -
Tpr1g3909 255 PANTHER OS09G0542900 PROTEIN 1 249 IPR038796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3909 Tpr-Chr1 43199590 43200963 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3909 - - mtr:MTR_1g026110 392.889
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3909 1 43199590 43200963 Tpr1g3909 1 43199590 43200963 ECH
Tpr1g3909 1 43199590 43200963 Tpr7g0195 7 1647140 1648290 PCT