Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr1g3906 | ATGGGATTAGGATTGTTCAAAGTTTTTTTTTGTTGTACCACAAATCAAGACATTCCCATTGTTTCTTCCGATTCAGAGTCCTCTCCTCGGCATAGCTCTGGCTATGGCTACAAACAACCAATGCTGCCAATTAGTCCCAAAAAATCTCCATCTTCTACTAGTAATCCACAAATTGGACAAATTTTAGGGAAACCTTACGTTGTAATAACCCAAATGTACGAGATGAACAAAGAGCTCGGACGAGGTCAATCAGGCGTGACATATTTATGTACCGAGAAAAGAACTGGGAGAGAATACGCGTGCAAATCGATATCAAGGGCAAAACTGTTGAGTGATCAAGAGATAGAAGATGTAAGAAGAGAGGTTATGATTCTGCAACATCTCTCGGGGCAACCGAATATAGTTGAATTCAGAGGAGCTTATGAGGACAAACAGAATGTGTATTTGGTGATGGAGGTTTGCAAAGGAGGTGAACTTTTCGATCGAATTATTGCTAAAGGGAACTATACCGAGCGTGAAGCAGCTACTATCATGAGACAGATTGTGAATGTGGTGCATGTGTGCCATTTCATGGGTGTTATGCATCGTGATCTTAAGCCTGAGAATTTCTTACTTGCTTCACAGGATGAGAATGCTACCGTTAAAGCTACTGATTTTGGACTCTCCATTTTCCTTGAAGAAGGTAAAGTATATAAAGAGCTTGTTGGAAGTGCATACTATGTAGCTCCAGAGGTGTTAAAACGGAATTATGGAAAGGAGATTGATGTCTGGAGTGCAGGAGTTATTTTATATATCCTCTTATGTGGGGTGCCTCCATTTTGGGCTGAAACCGAAAAAGGCATATTTCAAGCTATTTTGGAAGGTAAGCTCGATCTGGAGAGTGCACCGTGGCCTTCTATTTCAGCTGCTGCAAAAGATTTGATCAGGAAAATGCTGAGTTATGACCCTAAGAAACGCATTACAGCTTCTGATGCCCTTGAACACCCATGGATGAAGGAAGGTGGCGAGGCATCAGACAAGCCTTTAGACAATGCTGTTTTAATTAGGATGAAACAGTTCAGAGCAATGAACAAGATGAAGAAACTTGCTTTAAAGGTAATAGCAGAAAACCTTTCAGATGAAGAAATCAAGGGATTGAAACAAATGTTCAACAATATTGATACTGATCGAAGTGGCACAATCACGTATGAAGAACTCAAATCTGGACTGTCCAAATTGGGATCCAAGCTTAATGAATCTGAAATAAAGCAGCTAATGGATGCTGCTGACGTTGACAAGAATGGAACTATTGACTATCATGAATTCATTACTGCCACTATTAATCGGCATAAACTTGAGAGGGAAGAGAATTTGTTCAAGGCTTTTCAATACTTTGACAAGGATAACAGCGGTTATGTAACAAGAGAAGAACTTAGACAAGCTTTGGCTGAATATCAAATGGGAGATGAAGCAACTATAGATGAAGTCATTGATGATGTTGACACTGACAATGATGGGAGAATTAATTACCAGGAGTTTGTAGCTATGATGAAAAAGGGAACCTTGGATAATGATGACAAAGAGAAACCGCAATAA | 1575 | 0.3975 | MGLGLFKVFFCCTTNQDIPIVSSDSESSPRHSSGYGYKQPMLPISPKKSPSSTSNPQIGQILGKPYVVITQMYEMNKELGRGQSGVTYLCTEKRTGREYACKSISRAKLLSDQEIEDVRREVMILQHLSGQPNIVEFRGAYEDKQNVYLVMEVCKGGELFDRIIAKGNYTEREAATIMRQIVNVVHVCHFMGVMHRDLKPENFLLASQDENATVKATDFGLSIFLEEGKVYKELVGSAYYVAPEVLKRNYGKEIDVWSAGVILYILLCGVPPFWAETEKGIFQAILEGKLDLESAPWPSISAAAKDLIRKMLSYDPKKRITASDALEHPWMKEGGEASDKPLDNAVLIRMKQFRAMNKMKKLALKVIAENLSDEEIKGLKQMFNNIDTDRSGTITYEELKSGLSKLGSKLNESEIKQLMDAADVDKNGTIDYHEFITATINRHKLEREENLFKAFQYFDKDNSGYVTREELRQALAEYQMGDEATIDEVIDDVDTDNDGRINYQEFVAMMKKGTLDNDDKEKPQ* | 525 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr1g3906 | 524 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 193 | 205 | IPR008271 | GO:0004672|GO:0006468 | |
Tpr1g3906 | 524 | SUPERFAMILY | Protein kinase-like (PK-like) | 70 | 338 | IPR011009 | - | |
Tpr1g3906 | 524 | Pfam | EF-hand domain pair | 379 | 439 | IPR002048 | GO:0005509 | |
Tpr1g3906 | 524 | Pfam | EF-hand domain pair | 448 | 511 | IPR002048 | GO:0005509 | |
Tpr1g3906 | 524 | ProSitePatterns | EF-hand calcium-binding domain. | 494 | 506 | IPR018247 | - | |
Tpr1g3906 | 524 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 446 | 481 | IPR002048 | GO:0005509 | |
Tpr1g3906 | 524 | ProSitePatterns | Protein kinases ATP-binding region signature. | 79 | 102 | IPR017441 | GO:0005524 | |
Tpr1g3906 | 524 | SMART | serkin_6 | 73 | 331 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr1g3906 | 524 | Pfam | Protein kinase domain | 73 | 331 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr1g3906 | 524 | SMART | efh_1 | 450 | 478 | IPR002048 | GO:0005509 | |
Tpr1g3906 | 524 | SMART | efh_1 | 378 | 406 | IPR002048 | GO:0005509 | |
Tpr1g3906 | 524 | SMART | efh_1 | 414 | 442 | IPR002048 | GO:0005509 | |
Tpr1g3906 | 524 | SMART | efh_1 | 485 | 513 | IPR002048 | GO:0005509 | |
Tpr1g3906 | 524 | ProSitePatterns | EF-hand calcium-binding domain. | 423 | 435 | IPR018247 | - | |
Tpr1g3906 | 524 | Gene3D | - | 339 | 517 | - | - | |
Tpr1g3906 | 524 | ProSiteProfiles | Protein kinase domain profile. | 73 | 331 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr1g3906 | 524 | ProSitePatterns | EF-hand calcium-binding domain. | 459 | 471 | IPR018247 | - | |
Tpr1g3906 | 524 | Gene3D | Phosphorylase Kinase; domain 1 | 75 | 158 | - | - | |
Tpr1g3906 | 524 | Gene3D | Transferase(Phosphotransferase) domain 1 | 159 | 338 | - | - | |
Tpr1g3906 | 524 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 482 | 516 | IPR002048 | GO:0005509 | |
Tpr1g3906 | 524 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 410 | 445 | IPR002048 | GO:0005509 | |
Tpr1g3906 | 524 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 374 | 409 | IPR002048 | GO:0005509 | |
Tpr1g3906 | 524 | CDD | STKc_CAMK | 73 | 330 | - | - | |
Tpr1g3906 | 524 | SUPERFAMILY | EF-hand | 370 | 511 | IPR011992 | - | |
Tpr1g3906 | 524 | ProSitePatterns | EF-hand calcium-binding domain. | 387 | 399 | IPR018247 | - | |
Tpr1g3906 | 524 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 41 | 517 | - | - | |
Tpr1g3906 | 524 | PANTHER | CALCIUM-DEPENDENT PROTEIN KINASE 29 | 41 | 517 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr1g3906 | Tpr-Chr1 | 43152735 | 43158360 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr1g3906 | 44 | 524 | EF-hand Containing Proteins | AT3G20410 | 70.062 | 0.0 | 724 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CAMK_CDPK | Tpr1g3906 | Pkinase | 2.2e-77 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr1g3906 | K13412 | - | gmx:100816157 | 818.15 |