Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr1g3883 | ATGACTCTTGAAGACTTCTTTACCTTGACTGAGATGAAAGATGGGCTCATAGCCCCTTCTCGGGTGCAGGAATTGGTCTCTGTAATGAAGAAGGAGCAAGACAGCGTTGTGAAGATCACTGGTGATACAATGAGACAGTGGGCTGCTGTTGCAAGCACTATTGCTGCTACAGAGAATAAAGATTGCCTTGACCTTTTTATTCAATTAGATGGACTGTGGTTCATCGATAAATGGTTAACTGATGCTCAAAAATTTGGTGCTGATACAAATGATGGTTTCGTGGAAGAGTCAATTACTGCAATGTTACGAGCAATTGAAAAGCTATATCTAGACAGTGAAAAGCCAATTACATCAGGAATTTGGGCCACTGTAAGTAACCTTCTTGATCATCACAGCTCCAAGGTTCAAGATAGAGCTAGAGGATTATTTGACAAGTGGAAAGGGGTTGAAAACGGAGATGCTGAAACTCATGATATGGATACTGGTCAAAGAAACCATATGAGTGATAAGAATCTTAAGGAGGAAGGCCAGTTGTCTTCAGTGGATGAGGCTAGTAATGACAATGATCATGTGCTGCAACTTGAAGGGGGTGAGAAGTCGATATTGAGAAGCTCGGATACTCAGATACCAGATAAGGTTGCTAATGTAAAGAAAGAGAGTTCTGACAATGCACACCAATCCTCTGTAAGTTTGGATTGTGAAGATAACAAAGAGCGGTCAAACCATCTTGCTACTGTTTTGACTTCTGTTCAAGAAAATGCTCCCGCAAGTGAAGGTGAGTTGACATCGTCTGGGATCTATAACTTACCTGTACCGAAACTTAGAGAACAACCAGATGATTTACAGTTAAATGACCTATCCATGAAGGAGAAGCAAGAATTGAATGATAATGGCCCTGCAGAAAAAATAGGAGCACCAATAAGTCCTAAGCATGAAACTGTTTCTGTTGGTGTTAGTGAAGCAAAAGTTAAGCCTGTGCCTGCACCAATAATGCCTGAATCTTCTTTGGAACATAAAGTTAAAAGCAATGAAGATGGTGTTAGTGATAGAGTAATTGTTTCTTGTAGCATGAGAACGCGTGCCTCTGATAGAATGAATGTGTTGGATGGTTCCAGAACCACGAATTCTAGCAATCCACAACTATCCAAAGCTTCGGTGAAGGAAGAAGGCAAGAGCCAAGTTTCTAATCAAGGTGACGATACCTCAAATGGCTCTGATTCTTTTAAACAAAGAAAAGATCCCACAAGCCCCAACATTATTGACAAGAGTTCTGACATGGAACTTGAGTATGGTATTGTTGATGCTTTGGAAGTCGCCCGACAAGTTGCTCAGGAAGTTGATAGAAAATATGCCAGATCTGTAAAGGAAGACAAGGACCCAGTTTCTGATCAAGATGATGATACCTCAAATAGTTCTGATTCCTACAAACAGAGCAAAGGTTCCAGAAGCCCTAACATTGTTAACAAGAATTCTAACATTGTTAACAAGAATTCTGACATTGAACTTGAGTATGGTATTGTTGATGCTTTACAAGTCGCTCGACAAGTTGCTCAGGAAGTTGAGAGAGAACTCAATAACTCTTCTTCAGAGAAAATCTCAGAAGGTGGAATCAGGCAAGCTGGCAGCCCCGATTCTGTTGGGAAAAATGATGACCTTGCTTGTGCCCTACCTGAGGAGGTGTCATTCAGGCAAAGCAACTCTGCTGAGGCATGTCCTGAGAAGAAGCATATGAGTGTTTCAGATGATATTATGGCTGAGCCAGAATGTATCCCTGACTTGGAGTCCTCGCAATTGACTGAAGCAGCTCAAGATCCAGGAGGTAATTCAGAGAAAAGCCTTTGCACCTTTGATCTTAATGAAGAATATGGTTCTGATGATGTGAATGTTTCTGCAAATACCATATCTACAACACCGATACCTGTTGTCTCTGCTTCAAAACCTGCACAGACTTCAGGATTGCCAACAGCCCCTTTACAGTTTGAAGGAACACTTGGATGGAAAGGGTCGGCTGCCACCAGTGCCTTTCGTCCTGCATCACCTCGTAAAATTTCTGATAATCAAAAGACTGTTTCTGCTGGTGGGAACTCTGATATTTCAAAACAGAGGCAGGATTTTCTTGATTTTGATTTAAATGTGGCTGGGGGTGAAGAAGAATTGGTAAAACAAATTGGTGAATCTTCAAGCCTGCCTTCTGGGCAATCATCAGTGGAACATAGCCCTAAAAGATCAAGGAGGTTTGAATTAGATTTGAACAGTGCTGGTGATGATGGTGATAATACCCAACCTTCATATCAGAGGATGGAGGGGCAGCTCTTCTTTGGAAGAAATGGCTATTCGAGCCCATCACCTGCATCATCTTCGTCGTCAATGCAGCCTTCAGTTCGAAACATTGATTTGAATGATAGACCATACTTTCAAACTGATTTGGTGGACCAAGGGCCTATTAAATCTTCTTCAAGCATCGAAGCATATGGACTTTCCAAATCTGACGCGCCTGCAATATCTATTTTGGGTGCCAAGGTGGAAGTTGGTAGAAGAGAGCATGTTCCTCAAATTTGGTCTTTGCCAAATGGCAAGGCTGTTGAGCCTGCAATGGATCTTACAATGATGCCAGGATCAGGTGGCGTTTCAGGGATGGGCCCTGCGGTGTCCTACAATCATTCAACTTTTTTGGGATATAATGGACTGGCGTCAATGCCCTCTTTGTCTTTTTCGCCAGCCGCTTATGGATCAGGTGGTACAATTCCATATATGGTGGACTCAAGAGGAGCCCCAGTTGTGCCTCAAGTTGGGGGATCTTCATCAACTGTCCTGTCATCGTACGCTCAGCCCCCGTATATTATGAGCATGCCCGGTACGCAACTTGGTTTAAATGGTGTTGGACCTTCCCGTCCCAACTTTGATCTTAACTCTGGCTACTTGATTGATGGCGGGAATAGAGATGCATTGGCTACAAGGCCATTTTTGTTTCCTGGTCAGAGCAGAGCTATGGAGGATAGGACCCTTCAACAATCCTCAAGTTCAGGGGTCGGTGGGAAAAGAAAAGAACCAGATGGTAGCTGCTGGGAAACCTATCCATTTGGCTACAAACATCAGCAACCGCCGTGGAAGTAG | 3114 | 0.4303 | MTLEDFFTLTEMKDGLIAPSRVQELVSVMKKEQDSVVKITGDTMRQWAAVASTIAATENKDCLDLFIQLDGLWFIDKWLTDAQKFGADTNDGFVEESITAMLRAIEKLYLDSEKPITSGIWATVSNLLDHHSSKVQDRARGLFDKWKGVENGDAETHDMDTGQRNHMSDKNLKEEGQLSSVDEASNDNDHVLQLEGGEKSILRSSDTQIPDKVANVKKESSDNAHQSSVSLDCEDNKERSNHLATVLTSVQENAPASEGELTSSGIYNLPVPKLREQPDDLQLNDLSMKEKQELNDNGPAEKIGAPISPKHETVSVGVSEAKVKPVPAPIMPESSLEHKVKSNEDGVSDRVIVSCSMRTRASDRMNVLDGSRTTNSSNPQLSKASVKEEGKSQVSNQGDDTSNGSDSFKQRKDPTSPNIIDKSSDMELEYGIVDALEVARQVAQEVDRKYARSVKEDKDPVSDQDDDTSNSSDSYKQSKGSRSPNIVNKNSNIVNKNSDIELEYGIVDALQVARQVAQEVERELNNSSSEKISEGGIRQAGSPDSVGKNDDLACALPEEVSFRQSNSAEACPEKKHMSVSDDIMAEPECIPDLESSQLTEAAQDPGGNSEKSLCTFDLNEEYGSDDVNVSANTISTTPIPVVSASKPAQTSGLPTAPLQFEGTLGWKGSAATSAFRPASPRKISDNQKTVSAGGNSDISKQRQDFLDFDLNVAGGEEELVKQIGESSSLPSGQSSVEHSPKRSRRFELDLNSAGDDGDNTQPSYQRMEGQLFFGRNGYSSPSPASSSSSMQPSVRNIDLNDRPYFQTDLVDQGPIKSSSSIEAYGLSKSDAPAISILGAKVEVGRREHVPQIWSLPNGKAVEPAMDLTMMPGSGGVSGMGPAVSYNHSTFLGYNGLASMPSLSFSPAAYGSGGTIPYMVDSRGAPVVPQVGGSSSTVLSSYAQPPYIMSMPGTQLGLNGVGPSRPNFDLNSGYLIDGGNRDALATRPFLFPGQSRAMEDRTLQQSSSSGVGGKRKEPDGSCWETYPFGYKHQQPPWK* | 1038 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr1g3883 | 1037 | Gene3D | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 18 | 151 | IPR035441 | - | |
Tpr1g3883 | 1037 | Pfam | TFIIS helical bundle-like domain | 101 | 147 | IPR017923 | - | |
Tpr1g3883 | 1037 | MobiDBLite | consensus disorder prediction | 723 | 743 | - | - | |
Tpr1g3883 | 1037 | MobiDBLite | consensus disorder prediction | 366 | 422 | - | - | |
Tpr1g3883 | 1037 | ProSiteProfiles | TFIIS N-terminal domain profile. | 80 | 153 | IPR017923 | - | |
Tpr1g3883 | 1037 | MobiDBLite | consensus disorder prediction | 994 | 1037 | - | - | |
Tpr1g3883 | 1037 | MobiDBLite | consensus disorder prediction | 363 | 423 | - | - | |
Tpr1g3883 | 1037 | MobiDBLite | consensus disorder prediction | 523 | 548 | - | - | |
Tpr1g3883 | 1037 | MobiDBLite | consensus disorder prediction | 671 | 698 | - | - | |
Tpr1g3883 | 1037 | PANTHER | TRANSCRIPTION ELONGATION FACTOR (TFIIS) FAMILY PROTEIN | 451 | 1037 | - | - | |
Tpr1g3883 | 1037 | PANTHER | TRANSCRIPTION ELONGATION FACTOR (TFIIS) FAMILY PROTEIN | 387 | 448 | - | - | |
Tpr1g3883 | 1037 | PANTHER | TRANSCRIPTION ELONGATION FACTOR (TFIIS) FAMILY PROTEIN | 1 | 389 | - | - | |
Tpr1g3883 | 1037 | PANTHER | TRANSCRIPTION ELONGATION FACTOR (TFIIS) FAMILY PROTEIN-RELATED | 1 | 389 | - | - | |
Tpr1g3883 | 1037 | PANTHER | TRANSCRIPTION ELONGATION FACTOR (TFIIS) FAMILY PROTEIN-RELATED | 387 | 448 | - | - | |
Tpr1g3883 | 1037 | PANTHER | TRANSCRIPTION ELONGATION FACTOR (TFIIS) FAMILY PROTEIN-RELATED | 451 | 1037 | - | - | |
Tpr1g3883 | 1037 | MobiDBLite | consensus disorder prediction | 450 | 472 | - | - | |
Tpr1g3883 | 1037 | Coils | Coil | 510 | 530 | - | - | |
Tpr1g3883 | 1037 | MobiDBLite | consensus disorder prediction | 450 | 490 | - | - | |
Tpr1g3883 | 1037 | MobiDBLite | consensus disorder prediction | 679 | 698 | - | - | |
Tpr1g3883 | 1037 | MobiDBLite | consensus disorder prediction | 473 | 490 | - | - | |
Tpr1g3883 | 1037 | SUPERFAMILY | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 61 | 157 | IPR035441 | - | |
Tpr1g3883 | 1037 | MobiDBLite | consensus disorder prediction | 216 | 237 | - | - | |
Tpr1g3883 | 1037 | MobiDBLite | consensus disorder prediction | 997 | 1011 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr1g3883 | Tpr-Chr1 | 42961469 | 42967364 | Dispersed |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | IWS1 | Tpr1g3883 | Med26 | 0.00029 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr1g3883 | - | - | lja:Lj5g3v0238160.2 | 1340.1 |