Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3850 ATGTGGTTTCTTGTGCTTCTTTCTCTGTTGCCAATCTTTATTCTATTTATCATCCATATACACAAAACAAAGAGTACTAGAAGAACATCATTAATTCCACCAGGTCCTAAACCACTTCCTATAATTGGAAATCTACACCAAATTGACCCTTCATCACCACATCACTCCTTATGGCAACTTTCCAAACATTATGGACCTATCATGTCTTTGCACCTTGGCTATATCCCAACCTTAGTTGTTTCTTCATCAAAAATGGCAAAAGAAGTGTTGCAAACCCATGACCTTAAATTTGCAAGTAGACCAGCTTTCCTAGGACTAAGAAAATTGTCTTACAATTGTTTAGATTTGGCTTTTGCACCTTATAGCCCTTATTGGAAAGAAATGAAAAAACTTTGTGTTCTTCATCTATTTAGCTCTCAACGTGTTCATTCTTTTAGACCCATTAGAGAAAATGAAGTGGTCCAATTGATTCAAAAGTTGTCACAATATGATGGTGATGAAAAAGGTGTTAACTTAAGTGAAAAAATGATGTCTTTCACAAATACACTTATATGTAAGATAGCTTTAGGGAAAAAATATGTTTTTGATTATGAGGAAGAAGTTGAATTGGGAAGTGAACAAAGGAGAAGTAAATTGCAAATTTTGCTTAATGAAGCTCAAGCTTTGTTAACTGAATTTTACTTTTCAGATCATTTTCCTTTGTTAGGTTGGGTTGATAAAGTCAAAGGAACTATTTGGAGGCTTGACAAAACTTTCAAGGAATTGGATTTGATATACCAAAGAGTCATTGATGATCATATGGATAATTTAGCAAGGCCTAAAAGCAAGGAACAAGTGGCTGATATCATTGATATATTATTGCAGATGATGAATGATCAATCACTTCATTCACTTTCTTTTGAGCTCACTTTTGACCACATCAAAGCTTTGCTTATGGAACAGACACAAGTTCAGCAATAG 960 0.3406 MWFLVLLSLLPIFILFIIHIHKTKSTRRTSLIPPGPKPLPIIGNLHQIDPSSPHHSLWQLSKHYGPIMSLHLGYIPTLVVSSSKMAKEVLQTHDLKFASRPAFLGLRKLSYNCLDLAFAPYSPYWKEMKKLCVLHLFSSQRVHSFRPIRENEVVQLIQKLSQYDGDEKGVNLSEKMMSFTNTLICKIALGKKYVFDYEEEVELGSEQRRSKLQILLNEAQALLTEFYFSDHFPLLGWVDKVKGTIWRLDKTFKELDLIYQRVIDDHMDNLARPKSKEQVADIIDILLQMMNDQSLHSLSFELTFDHIKALLMEQTQVQQ* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3850 319 Gene3D Cytochrome P450 25 315 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g3850 319 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g3850 319 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g3850 319 PRINTS E-class P450 group I signature 179 197 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g3850 319 PANTHER CYTOCHROME P450 83B1 7 313 - -
Tpr1g3850 319 PANTHER CYTOCHROME P450 71B11-RELATED 7 313 - -
Tpr1g3850 319 Pfam Cytochrome P450 33 313 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g3850 319 SUPERFAMILY Cytochrome P450 33 312 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3850 Tpr-Chr1 42539821 42541945 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3850 4 313 Cytochrome P450 AT4G31500 39.677 6.84e-73 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3850 - - adu:107485348 399.438