Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3849 ATGGGGTTTCTTGTGCTTCTTTCTCTCTTGCCAATCTTTACTCTATTCATCATCATCCATATACTCAAATTAAAGAGTACTAGAAGAAAATCATCAATTCCACCACCAGGTCCTAAACCACTTCCTATAATTGGATATCTACACAAAATTGACCCTTCATCACCACATCAATCCCTATGGCAACTCTCCAAACACTATGGACCTATCATGTATTTGCACCTTGGCTATATCCCAACCTTAGTTGTTTCTTCATCAAAAATGGCAAAAGAAGTGATGCAAACACATGACCTTAAATTTGCAAGTAGACCATCTTTCCTAGGACTAAGAAAATTATCTTACAATTGCTTAGATTTGGCTTTTGCACCTTATAGCCCTTATTGGAAAGAAATGAAAAAACTTTGTGCTCTTCACCTCTTTAGCTCTCAACGTATTCATTCTTTTAGATCCATTAGAGAAAATGAAGTTGCCCAATTGATTCAAAAGTTGTCACAATATGTTGGTGATGAAAAAGGTGTGAATTTGAGTGAAACAATGATGTCATTCACAAATACACTTATATGTAAGATAGCTTTTGGGAAAAAATATGTTGTTGATTATGAGGAAGAAGTTGATTTGGGAAGTGAAAGGAGAAGTAGATTGCAAATTTTGCTTAATGAAGCTCAAGCTTTGTTGAGTGAATTTTATTTTTCAGATCATTTTCCTTTGTTTGGTTGGGTTGATAGAGTTAAAGGGACTCTTAGGAGGCTTGATAAAACTTTCAAGGAATTGGATTTGATATACCAAAGAGTCATTGATGATCATATGAATAATTTAGGAAGGCCTAAAAACAAGGAGCAAGAAGTAGTTGATATCATTGATATATTATTGCAAATGATGAATGATCACTCACTTTCTTTTGAGCTCACTCTTGACCACATCAAAGCTTTGCTTATGAACATTTTTTTAGCAGGAACAGACACAAGTTCAGCAATAGTGGTTTGGGCTATGACAGCATTGATGAACAATCCTAGAGTGATGAATAAGGTTCAAATGGAAATCAGAAACTTATATGAAGATAAAGATTTCTTAAATGAAGATGATATTGAAAAGCTTCTTTATCTTAAATCAGTGGTGAAAGAAACAATGAGATTATTCCCTCCATCACCACTACTAGTGCCAAGAGAAACAATGGAAAATTGTAACATAGATGGCTATGAGATTAAACCAAAAACTCTGGTGTATGTTAATGCATGGGCCATAGGAAGAGATCCTGAGGATTGGGAAGACCCCGAAGAGTTTTATCCTGAAAGATTCGTTACGAGTTCGGTGGATTTTAAAGGGAAGAATTTTGAGTTGATTCCATTTGGAAGTGGAAGAAGAATGTGTCCTGCAATGAACATGGGAGTGCTCACTGTTGAGCTTTCACTCGCTAATCTTCTGCACTCTTTTGATTGGAAATTACCTAATGGTTTTGATAAGGAACAAGTGTTGGATACACAAGTCAAACCAGGAATCACTATGCATAAGAAAATTGATCTTTATCTTGTTCCAAAGAAAAGAAAATCATAA 1548 0.3508 MGFLVLLSLLPIFTLFIIIHILKLKSTRRKSSIPPPGPKPLPIIGYLHKIDPSSPHQSLWQLSKHYGPIMYLHLGYIPTLVVSSSKMAKEVMQTHDLKFASRPSFLGLRKLSYNCLDLAFAPYSPYWKEMKKLCALHLFSSQRIHSFRSIRENEVAQLIQKLSQYVGDEKGVNLSETMMSFTNTLICKIAFGKKYVVDYEEEVDLGSERRSRLQILLNEAQALLSEFYFSDHFPLFGWVDRVKGTLRRLDKTFKELDLIYQRVIDDHMNNLGRPKNKEQEVVDIIDILLQMMNDHSLSFELTLDHIKALLMNIFLAGTDTSSAIVVWAMTALMNNPRVMNKVQMEIRNLYEDKDFLNEDDIEKLLYLKSVVKETMRLFPPSPLLVPRETMENCNIDGYEIKPKTLVYVNAWAIGRDPEDWEDPEEFYPERFVTSSVDFKGKNFELIPFGSGRRMCPAMNMGVLTVELSLANLLHSFDWKLPNGFDKEQVLDTQVKPGITMHKKIDLYLVPKKRKS* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3849 515 Gene3D Cytochrome P450 19 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g3849 515 Coils Coil 339 359 - -
Tpr1g3849 515 PANTHER CYTOCHROME P450 71B11-RELATED 14 512 - -
Tpr1g3849 515 Pfam Cytochrome P450 35 503 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g3849 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 448 457 IPR017972 GO:0005506|GO:0016705
Tpr1g3849 515 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g3849 515 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g3849 515 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g3849 515 PRINTS E-class P450 group I signature 305 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g3849 515 PRINTS E-class P450 group I signature 325 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g3849 515 PRINTS E-class P450 group I signature 368 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g3849 515 PRINTS E-class P450 group I signature 409 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g3849 515 PRINTS E-class P450 group I signature 445 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g3849 515 PRINTS E-class P450 group I signature 455 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g3849 515 PRINTS P450 superfamily signature 316 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g3849 515 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g3849 515 PRINTS P450 superfamily signature 446 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g3849 515 SUPERFAMILY Cytochrome P450 35 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g3849 515 PANTHER CYTOCHROME P450 83B1 14 512 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3849 Tpr-Chr1 42539360 42547109 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3849 29 512 Cytochrome P450 AT3G26330 48.665 4.92e-156 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3849 - - gmx:606704 669.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3849 1 42539360 42547109 Tpr1g3849 1 42539360 42547109 ECH