Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3818 ATGGCAGCAGAAGAGGGACAAGTCATCAGTGTTCATACCGTTGAATCATGGAAGGAACAGATCCAGAAGGGAAATGACTCCAAAAAATTGATTGTGGTGGATTTTACTGCTTCATGGTGTGGTCCATGCCGTTTTATTTCACCAATTCTAGCAGATATTGCTAAGAAGACACCTCAAGTCATCTTCCTCAAGGTGGATGTGGATGAATTGAAGAGTGTTGCTGAGGAATGGTCTGTTGAGGCTATGCCAACCTTCTTGTTCTTGAAAGAAGGTAAGGAAGTGGAAAAAGTAGTTGGTGCTAGGAAGGAAGAACTTCAAATTGCTGTAACCAAGCATGCAACTGCTTGA 348 0.4253 MAAEEGQVISVHTVESWKEQIQKGNDSKKLIVVDFTASWCGPCRFISPILADIAKKTPQVIFLKVDVDELKSVAEEWSVEAMPTFLFLKEGKEVEKVVGARKEELQIAVTKHATA* 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3818 115 PANTHER THIOREDOXIN 3 115 - -
Tpr1g3818 115 Pfam Thioredoxin 10 108 IPR013766 -
Tpr1g3818 115 PIRSF Thioredoxin 7 114 IPR005746 GO:0015035
Tpr1g3818 115 PRINTS Thioredoxin family signature 31 39 - -
Tpr1g3818 115 PRINTS Thioredoxin family signature 39 48 - -
Tpr1g3818 115 PRINTS Thioredoxin family signature 78 89 - -
Tpr1g3818 115 SUPERFAMILY Thioredoxin-like 5 112 IPR036249 -
Tpr1g3818 115 CDD TRX_family 19 104 - -
Tpr1g3818 115 Gene3D Glutaredoxin 1 115 - -
Tpr1g3818 115 ProSitePatterns Thioredoxin family active site. 32 50 IPR017937 -
Tpr1g3818 115 ProSiteProfiles Thioredoxin domain profile. 1 115 IPR013766 -
Tpr1g3818 115 PANTHER THIOREDOXIN 3 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3818 Tpr-Chr1 42180959 42183127 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3818 K03671 - zju:107406454 195.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3818 1 42180959 42183127 Tpr7g0272 7 2225042 2226614 PCT