Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3791 ATGGGTTCTTTGTCCGAAACTGTTTGCGTTACGGGAGCTGCAGGCTTCATTGGTTCATGGTTGGTCATGAGACTCATCGAGCGTGGTTACACAGTTAGAGCCACTGTTCGCGACCCAGATAACATGAAGAAAGTGAAACATTTGTTGGAACTGCCGGGTGCAAATAGCAAATTGTCTCTTTGGAAGGCTGATCTTGATAAAGAGGGGAGTTTTGATGAAGCAATTAAAGGGTGCACAGGAGTTTTTCATGTTGCTACACCAATGGATTTTGAATCCAAGGACCCTGAGAATGAAGTGATCAAGCCTACCATAAATGGAGTCCTTGACATCATGAAAGCATGCCTCAAGGCCAAAACTGTCCGTAGATTGGTTTTCACATCATCGGCCGGAACCGTCAATGTTACTGAAAATCAAAAGTCCTCATGGGACGAGAGTTGTTGGAGTGACGTTGAGTTTTGCCGGAGAGTAAAGATGACTGGATGGATGTATTTTGTTTCTAAGACACTTGCGGAGCAAGAAGCATGGAAATTTGCCAAAGAGCACAACATGGACTTCATCACAATCATTCCACCACTTGTTGTTGGTCCCTTTCTTAGTCCATCTATGCCACCTAGCCTAATCACCGCCCTTTCCCCTATCACCGGAAACGAGGGCCATTATTCGATCATAAAGCAAGGTCAATTTGTCCATTTGGATGATCTTTGTGAAGCCCACATATTCTTGTTTGAACATTTGGAAGTAGAAGGGAGGTATATATGTTGTGCATGTGAAGCTAATATTCATGACATTGCAAAATTGATCAATGCAAAGTATCCAGAGTACAATGTTCCCACAAAGTTCAAAAATATTCCTGATCAATTGGAGCTTGTTAGATTTTCTTCAAAGAAGATCAAAGACTTGGGATTCGAGTTTAAATATGGCTTGGAGGATATGTACACCGAAGCAATTGACACATGCAGAGGAAAAGGATTTCTTCCTAAATTTGTTGAAGCTGCTCCTAAATCTATTGAAGCTCCTAAATTTGTTGAAGCTCCCCTTGGAGTCACTACTCATGAATAA 1059 0.4183 MGSLSETVCVTGAAGFIGSWLVMRLIERGYTVRATVRDPDNMKKVKHLLELPGANSKLSLWKADLDKEGSFDEAIKGCTGVFHVATPMDFESKDPENEVIKPTINGVLDIMKACLKAKTVRRLVFTSSAGTVNVTENQKSSWDESCWSDVEFCRRVKMTGWMYFVSKTLAEQEAWKFAKEHNMDFITIIPPLVVGPFLSPSMPPSLITALSPITGNEGHYSIIKQGQFVHLDDLCEAHIFLFEHLEVEGRYICCACEANIHDIAKLINAKYPEYNVPTKFKNIPDQLELVRFSSKKIKDLGFEFKYGLEDMYTEAIDTCRGKGFLPKFVEAAPKSIEAPKFVEAPLGVTTHE* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3791 352 Gene3D - 1 336 - -
Tpr1g3791 352 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 318 IPR036291 -
Tpr1g3791 352 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 3 333 - -
Tpr1g3791 352 CDD FR_SDR_e 8 302 - -
Tpr1g3791 352 Pfam NAD dependent epimerase/dehydratase family 8 246 IPR001509 -
Tpr1g3791 352 PANTHER DIHYDROFLAVONAL-4-REDUCTASE 2 3 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3791 Tpr-Chr1 41956935 41960186 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3791 3 317 Miscellaneous Gene Families AT4G27250 40.426 3.23e-83 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3791 K13082 - gmx:548087 594.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3791 1 41956935 41960186 Tpr1g3791 1 41956935 41960186 ECH