Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3790 ATGGGTTCGGAGTCGGAAACAGTTTGTGTTACCGGAGCTTCAGGTTTCATCGGATCGTGGCTTGTTATGAGACTTATGGAGCGTGGTTACACTGTTCGAGCCACTATTCGTGATCCAGATAACATGAAGAAGGTGAAACATTTGTTGGAACTGCCGGGTGCAAATAGCAAATTGTCTCTTTGGAAGGCTGATCTTGATAAAGAGGGGAGTTTTGATGAAGCAATTAAAGGGTGCACAGGAGTTTTTCATGTTGCTACACCAATGGATTTTGAATCCAAGGACCCTGAGAAGGAAATGATAAAGCCTACCGTAAACGGATTAATAGACATACTAAAAGCATGTGAGAAGACAAAAACAATTAGAAGATTGATTTTCACATCATCGGCTGGAACTCTGGACGTTACTGAGCATCTAAAGCATGTTATAGATGAAACTGATTGGAGTGACGTTGACTTTTGCCGTAGAGTCAAGATGACCGGTTGGATGTATTTTGTTTCAAAGACCCTAGCAGAGCAAGAAGCTTGGAAGTATTCGAAAGAGCACAACATAGACTTTGTCTCCATCATTCCACCTCTTGTTGTTGGCCCCTTTCTTATGGCCTCAATGCCACCTAGTTTAATCACTGCACTTTCCCTTATCACAGGAAATGAGGCACATTACTCAATCATAAAGCAAGGGCAATACGTCCATTTAGATGACCTTTGTCTTGCTCATATATTTCTGTTTGAGAATCCAAAAGCTCAAGGGAGATACATTTGCTGTTCACATGAGGCAACCATTCATGAAGTTGCAAAACTTATTAAAGAAAAACATCCAGAGTTCAATGTCCCTACAAAATTCAATGGAATCTCAGATGAATTGGAAATTATTAAATTTTGTTCAAAGAAGATCACAGATTTGGGCTTCAAATTTAAGTACAGCTTAGAAGACATGTTCACAGAAGCTGTAGAAACTTGTAGAGAAAAAGGGCTTCTTCCTAAAGCTGTGGAGAATCCAGCCAATGGTACCAAGAAGGAATAA 1020 0.4 MGSESETVCVTGASGFIGSWLVMRLMERGYTVRATIRDPDNMKKVKHLLELPGANSKLSLWKADLDKEGSFDEAIKGCTGVFHVATPMDFESKDPEKEMIKPTVNGLIDILKACEKTKTIRRLIFTSSAGTLDVTEHLKHVIDETDWSDVDFCRRVKMTGWMYFVSKTLAEQEAWKYSKEHNIDFVSIIPPLVVGPFLMASMPPSLITALSLITGNEAHYSIIKQGQYVHLDDLCLAHIFLFENPKAQGRYICCSHEATIHEVAKLIKEKHPEFNVPTKFNGISDELEIIKFCSKKITDLGFKFKYSLEDMFTEAVETCREKGLLPKAVENPANGTKKE* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3790 339 Pfam NAD dependent epimerase/dehydratase family 8 248 IPR001509 -
Tpr1g3790 339 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 3 330 - -
Tpr1g3790 339 PANTHER DIHYDROFLAVONAL-4-REDUCTASE 2 3 330 - -
Tpr1g3790 339 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 320 IPR036291 -
Tpr1g3790 339 CDD FR_SDR_e 8 302 - -
Tpr1g3790 339 Gene3D - 1 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3790 Tpr-Chr1 41951653 41954535 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3790 1 319 Miscellaneous Gene Families AT1G09510 42.462 2.78e-82 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3790 K13082 - gmx:732626 580.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3790 1 41951653 41954535 Tpr1g3790 1 41951653 41954535 ECH