Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3788 ATGGAGTTCGGAGCCACCACAGCGACGTTAACGAAGAAACTATCTAACAACTACAGTGTTTCCGGAAGATCTGCTTACGACGGCGTTTTCGCTGCTCCTATCAAGCTAAGAACTCCAAATTTCTCTCAACTCGATGATTACAACGAGATTTTCGGTAGCTCCGGAGCTTCTTCTTCTTCGATTCCGATTCTCGAACTTCCGGAGCTCAAAGAGAGGAGAGTAATGACGGAAGATGTTCGTCACTCGAAGCTCGATTACTCGAATGTCTTCGGCGGTTTCGAGAATCTAGACGCTGCTGTGCCGTTTGAGGAGGTGGTTGTTAAGAAGCCTAAAGAGAAAAGTAGTTTCAGAAACGGAGCAGCGAAACGGAACAAAGTCAAAAGTGGAGAACAAACTTTCCGGGAAGATCATACTAATTCTTCAAAGGAAATTCCGGCGGTAGCACCTTCATTTAATGGTGCCAAAAGGATCAATATGTCATATCATAAAGTTAGCCAAGGAAATGAAAATGGAGAAAATGGGACAACGCATATTGCTCAACTTCATGCTGTTCCTGCTTACACTCGTTTAATTGAAGAAGTCAATTCAGTGAAGATGAACGGCACTAAAAAGTCCATACCAGTAGCAGTAGCACATGATACTTCTTCTGGTAGTCATTGTGATGAGGGGATAAAAGAAGGTGGGAGCTATGCTAAATCATCTGTCGATCCTTCACCTAATAATGCCAAGAAACAGTCTTCCAACAATGGAGGGAAAGATATAAATAGACCCGAGTCTGACTCTATTGACCTGTTTTATGATGCGTGCGAGACTAGCTATGGAAGTGATGGAATTCATGAAGTCAAAGCTCCTTCTTCACAGACTGTGACAGCTAATTTGGAGGATAATAATATTAATAACTTCGATGCTTCGAGATCAATGGCAACCAACTGCCAAACATCTAAAAGTGGCAGATATGAAAGTCCTGCTGGTGCCGATTCGCCAACATACTTAGAGGATACGGTTGACTCAAATTCAGCTGCAGCAGCTTCTGTAGCTGCTTTAAGGAAGGCAATAGAAGAGGCTCAAGTAAGAATTAAGGTTGCAAAAGAATCAATGAGAAGAAAGAAAGAAGGCTATCCTGATCGTGTCAAACAGAAGTCTAGTATTGACTTGAAAGTCAAAGAAAAAAAGGAAGCTAAACTTGCATACAGAACAATGAAAGTTAAAGAGATTAATACAAGGCAAACATTTGGAGAAATGGATGCTTTGATGCCAATGAGAACAGAGAAAGTAAGATCAGATATTGGGGTTAAAGAAACGTGTACTGCCAACGAAGCACAGAATAAATTGAAATTGTCTCGAGCAGAACATAAGGAAGATGTTGAACTGAAAGAAGCAGATCAGAAAGGAAAAGATCTCGAGCTTAAAGAGGCAGGAAATGCTAAGAATGTCCCATATGATAGGAATGCTTCTGAAAAACCAGAAGAATTTGATCATTCAGTAGAAATGGTTAAGGAATATTTGGAACGGGAGAACTATAAAGAAGTCTGTGCAGATAACGAAGAGGGTTCTAGTGGAGAACATGTCCACGAAACTAAGCATAGGTGTCAAGAAGTTGTTGGTGAAACAATACTGATTCGGGAGACACTTGACAGTGGAGATACAGACAAAAGATTGAAGATTAAAGAAGTTGAGAACAAGGTTACACCGTTTAATGAACCAAATGGCCATGTAATTAACCTCGGCGGGAAACCGTCAATGACAGGAAATAAAGAAAATATTGGCTATAAGCCAGAAGATGGTAAGAAGGCTAAATGGTCCATTGATCCGGAAGAATGCCAAAAAATATTGAGAGCTATTCAGGAACTGGGAAAAGGTGAGAAACACATTTCTCAAGAGCAAAAAGAAAGTGATGTTGAAGTGGTCGATGGGCTGGAAGAATGTGAATTGACAGAGTCTCTGGAGCCAACAGACAGTGAGGGACCGTGCAGTCCTGATCGTTCAGAACTAATAAGCACGGACAAAGAAATATATAACTCGGGGTGTTTAGAGGATAAAAAAAGAAGGGATACATCTGGTTTTTTGGATGTAAATCAAGAGATAAAACATTCCTATTCTCAAGAAGCCACTGATAGTACATTTAGTGATATCTATGTGCAGGAAATCATGGAAGATATTGTTGACCATATTCACGATGATGAAGAGATTTATGAAAGAAATACAAAGGCTTGTGATTTAGATGGACATGTGAGGCTTCAAGATGCCCATCCTCGTGAAAATGAACTCGAGGGAGCCACGCATCTGATGGAAGAAAATGAGATGGAAAGGGAAGATAACAAGGTGCTAGAAGAAGTTATAGAGACTCAAACTGATCCAATTTATGAAGAGATAAGAGAAGAAGAATCTGGCATCGACACAGAACCCAGTTCTAGCTATGAGCCGGTTGAAACTGAGAAGTTGAGCAAAATTCAGGTTTCTAATACAGTCAATGAAACTCTTGAAGTAACTCCAGAGTTTTATTCATGTGATCTGCAGGATGATATAATAGTAGCAAGTAATGCTTCTATACAACATCAAGAGAAATACGAAGAGCCAGAATCTGTTCAAGAGACTAATGATTTCTGCGAGAAACATGCAGGCCAGACTTCTTCCTTTGATCAAGGTGTCCCTGTATTCGGTGAAACAGTGTATCAAATGAAAAATACATTTGAAACAGTTATCACTGAAGATGATTCTACAAATATTGGTGAAACTGACATGAAGGTTAGACAAAATCAAGATCAGTGTTTGGAAAAGGCAGAATCTGATTCTCATTTGGTTATGCTTGTTGAAGAAACAATTCCCGAGTCTATAGACATATGTAAGGATGTGAAGGAGGCTAGATTTGTGTCAGATGAAGAGATCAATGAGAATAGATCTAACTCCTCTAGTGAGGAAATGTTATTCGACAATGAACATGATATAGAAGCATCCCAGATGCCTAGTATGTCTGAATGGAAACAAAGCCCTATCGAAGAAGAGGAGGTTAAATCAATTCACAGAAATATAGAGGAGAGTCATCAAGCATCCAAAGCAATGGAAGAGAAGAAAGCCAATGATAAGTCACAAAAGGTAGAGGTGGATAAGGAACTCCTAAAAAAAATTGATGAAGCAAAAGATAGAGAAAGAGAAAAGGAGAAATTAGCTGTAGAAAGAGCTATTCGTGAAGCTCGTGAAAGGGCATTTGCTGATGCAAGAGAAAGGGCAGCTTTGGAGAGAGTTGCAGCTGAAGCACGTCAAAAGAACATTTTGAATGGACGAGAACGGCTAAAAGCCACTAGTCAAGCAACTGAGAAAACACCGGCTGAGAAGGCTGCTATAGAAGCAAAAATTAAATCTGAACGTGCTGCTGTGGAGAGAGCAACTGCAGAGGCAAGAACACGTGCCCTGGAGAGGGCACTGTCTGAGAAGGCTGCTTCTGATGCAAAAACTAAATCTGACAAGTCTGTTGCAGAGAAACACGGTGCTTCAAGAAGTAATGGAACAAAGCAACATTCAAAGTCTTTCAGCCATGGAGTTCGCGGTTCTACCGAGGTCTTTGATGGAGCTAATGCCGACTCTGCTCAGAGATGTAAAGCTAGGTCTGAGAGGCATCAGAGAATAGGGGAACGTGTGGCAAAGGCTCTTGCAGAAAAGAGTATGCGTGATCGGCTTGTGCAGAAAGAGCAAGAGGAGAGAAATAGGGTAGCTGAAGCTCTCGATGCTGATGTTAAAAGGTGGTCTAGTGGGAAGGCAGGAAACTTGAGAGCATTGCTTTCGACATTACAATATATCCTTGGACCCGATAGCGGCTGGCAACCAATTACTTTAACAGAAATAGTAACCGCACCTGCTGTAAAGAAAGCTTATCGTAAAGCTACTCTTTGTGTGCATCCTGACAAGCTGCAGCAGCGAGGGGCCAGCGTTCAGCAAAAGTACACTTGTGAGAAGGTTTTCGATCTTCTAAAGGAAGCTTGGAACAGATTCAACATGGAAGAAAGGTGA 4005 0.4102 MEFGATTATLTKKLSNNYSVSGRSAYDGVFAAPIKLRTPNFSQLDDYNEIFGSSGASSSSIPILELPELKERRVMTEDVRHSKLDYSNVFGGFENLDAAVPFEEVVVKKPKEKSSFRNGAAKRNKVKSGEQTFREDHTNSSKEIPAVAPSFNGAKRINMSYHKVSQGNENGENGTTHIAQLHAVPAYTRLIEEVNSVKMNGTKKSIPVAVAHDTSSGSHCDEGIKEGGSYAKSSVDPSPNNAKKQSSNNGGKDINRPESDSIDLFYDACETSYGSDGIHEVKAPSSQTVTANLEDNNINNFDASRSMATNCQTSKSGRYESPAGADSPTYLEDTVDSNSAAAASVAALRKAIEEAQVRIKVAKESMRRKKEGYPDRVKQKSSIDLKVKEKKEAKLAYRTMKVKEINTRQTFGEMDALMPMRTEKVRSDIGVKETCTANEAQNKLKLSRAEHKEDVELKEADQKGKDLELKEAGNAKNVPYDRNASEKPEEFDHSVEMVKEYLERENYKEVCADNEEGSSGEHVHETKHRCQEVVGETILIRETLDSGDTDKRLKIKEVENKVTPFNEPNGHVINLGGKPSMTGNKENIGYKPEDGKKAKWSIDPEECQKILRAIQELGKGEKHISQEQKESDVEVVDGLEECELTESLEPTDSEGPCSPDRSELISTDKEIYNSGCLEDKKRRDTSGFLDVNQEIKHSYSQEATDSTFSDIYVQEIMEDIVDHIHDDEEIYERNTKACDLDGHVRLQDAHPRENELEGATHLMEENEMEREDNKVLEEVIETQTDPIYEEIREEESGIDTEPSSSYEPVETEKLSKIQVSNTVNETLEVTPEFYSCDLQDDIIVASNASIQHQEKYEEPESVQETNDFCEKHAGQTSSFDQGVPVFGETVYQMKNTFETVITEDDSTNIGETDMKVRQNQDQCLEKAESDSHLVMLVEETIPESIDICKDVKEARFVSDEEINENRSNSSSEEMLFDNEHDIEASQMPSMSEWKQSPIEEEEVKSIHRNIEESHQASKAMEEKKANDKSQKVEVDKELLKKIDEAKDREREKEKLAVERAIREARERAFADARERAALERVAAEARQKNILNGRERLKATSQATEKTPAEKAAIEAKIKSERAAVERATAEARTRALERALSEKAASDAKTKSDKSVAEKHGASRSNGTKQHSKSFSHGVRGSTEVFDGANADSAQRCKARSERHQRIGERVAKALAEKSMRDRLVQKEQEERNRVAEALDADVKRWSSGKAGNLRALLSTLQYILGPDSGWQPITLTEIVTAPAVKKAYRKATLCVHPDKLQQRGASVQQKYTCEKVFDLLKEAWNRFNMEER* 1335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3788 1334 Coils Coil 1111 1131 - -
Tpr1g3788 1334 MobiDBLite consensus disorder prediction 995 1037 - -
Tpr1g3788 1334 Gene3D DnaJ domain 1206 1334 IPR036869 -
Tpr1g3788 1334 MobiDBLite consensus disorder prediction 986 1037 - -
Tpr1g3788 1334 MobiDBLite consensus disorder prediction 1110 1161 - -
Tpr1g3788 1334 ProSiteProfiles dnaJ domain profile. 1270 1334 IPR001623 -
Tpr1g3788 1334 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 620 1334 - -
Tpr1g3788 1334 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 1 631 - -
Tpr1g3788 1334 MobiDBLite consensus disorder prediction 1093 1206 - -
Tpr1g3788 1334 Coils Coil 345 365 - -
Tpr1g3788 1334 SUPERFAMILY Chaperone J-domain 1188 1330 IPR036869 -
Tpr1g3788 1334 MobiDBLite consensus disorder prediction 233 255 - -
Tpr1g3788 1334 MobiDBLite consensus disorder prediction 116 141 - -
Tpr1g3788 1334 MobiDBLite consensus disorder prediction 1162 1180 - -
Tpr1g3788 1334 MobiDBLite consensus disorder prediction 230 257 - -
Tpr1g3788 1334 PANTHER AUXILIN-LIKE PROTEIN 620 1334 - -
Tpr1g3788 1334 PANTHER AUXILIN-LIKE PROTEIN 1 631 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3788 Tpr-Chr1 41938799 41945203 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3788 - - mtr:MTR_1g022415 1766.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3788 1 41938799 41945203 Tpr1g3788 1 41938799 41945203 ECH
Tpr1g3788 1 41938799 41945203 Tpr7g0320 7 2581443 2586165 PCT