Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3779 ATGCTTCCCAATAACTGTTCTACACCTCTGGAGATTCCAATTCCAACCTCTTCTAAATTCAAGGTTCACCATTCAATATGCATAGAGCTTCAAGGATTCATTGATAGAATTTTGCATATTATATTATCAGTTGAATCTTCAAGACCAAATTGTACTTTAGCAATTCAAGCATTGTGCTCTTTGCACTTCACTTTGGATAAAGCCAATTTAATTATCAAACACTGTTCTGAAGCCAGTAAACTCTATCTGGTAATAACATCACACAAGATTCTTTCAAGATGCGAAAAAGTAAGAAACTCTTTCGCGTTGTACTTGACTCAGATTCAAAATACTGTTCCAATTTCATTGGTTGCTGAGATATGTACAATACTACATGATCTAAACCATACAAAATTTTCATTGGAATTTGAAGAAGATGAGACTAGGAAAATTTTACTTTCATTGCTTGAGAAGGAATTTTCTGATTCAGTTTCTATGGAGAATGCAGAAGTTGAAGCTATTCAAAATGTAGCATTGAGGTTGGATATAAAATCTTCATTTTCTCTCTTAGTAGAGAAAACAAGTCTTAAAAAGCAACTTGAAAAGGTCAATAAGACAAACCAAAAAGACAAGGAACTTTTACAATACCTTTTGTATTTGTTAATTAAATATGGAAAATTCATTTTTCAGTTTCAAAATGGAAACAATGTGTGTGTTAATCAAGTCAATATTATGATTATTGACTCTGTCGAACCAATTGTTGGAAATTTATGA 753 0.3147 MLPNNCSTPLEIPIPTSSKFKVHHSICIELQGFIDRILHIILSVESSRPNCTLAIQALCSLHFTLDKANLIIKHCSEASKLYLVITSHKILSRCEKVRNSFALYLTQIQNTVPISLVAEICTILHDLNHTKFSLEFEEDETRKILLSLLEKEFSDSVSMENAEVEAIQNVALRLDIKSSFSLLVEKTSLKKQLEKVNKTNQKDKELLQYLLYLLIKYGKFIFQFQNGNNVCVNQVNIMIIDSVEPIVGNL* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3779 250 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 5 26 229 - -
Tpr1g3779 250 PANTHER U BOX DOMAIN-CONTAINING 26 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3779 Tpr-Chr1 41874554 41876379 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3779 16 220 U-box Gene Family AT1G24330 37.379 7.04e-37 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3779 - - gmx:100796783 283.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3779 1 41874554 41876379 Tpr1g3779 1 41874554 41876379 ECH