Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3727 ATGACTATTATTCCTTCCTTACTTTGCTCTCTCCAAATTCTCCTAATCATAATTTTCACATCTCAAACCAAAGCTGAACCAGTATTCGATAAAATAAACTTATACCACTACAATTGTGATAATAGTAACAATAGAGGCAACTTCACAACCAATAGCACCTATCACAAAAACCTCAACACACTTTTATCCACCCTCACTTCCAACACACAAATCAACTATGGTTTCTACAATTTTTCTCACGGCGAAAACCTCGACAAAGTCTACGCAATTGGACTATGTCGAGGTGATCTTTTCCCGAACAATTGTCTAAGTTGCCTCGGAAGTGCTAGTGCAAATCTTACACGTGTTTGTCCAAATAAAAAAGAAGCGATTTTTTGGTCTGAAGATGAAAAATGCATGTTGCGTTATTCGGACCGATTAATATTAGGCGTCATGGAAGATAGTCCTAAGTTTGCTTCGAGTAACGATAATGATTCGGTTGATGTTGTTTTGTCCAATGAAGTTGTTAAAAATTTGTTGGGAAATTTAACAAGTAGAGCTATGAAAGGTGATTCTAGTCTTAAATACGCTGCATCAAGTTTACCTGGTCCTAAGTATGAGGTTATATATGGTTTAGTTCAGTGTACACCTGATTTATCTGAGAGTGATTGTAATTCATGTTTGGGTGAGAGTCTTTTTCAACAAATTCCCAGTTGTTGTAAAAATAAGATTGGTGGAAGAGTTGTTAGGCCTAGTTGTAATATGAGATTTGAGACCTTTCTTTTTTATGAACCTAGAGCATCGCCGCCGCCGCCACCACCATCTCCTCCTCCGCCCGCCACTATCGGTAGCAACACTACCTCACAAGGAAAAAGCAACAAGAATAGTATCATTGGCATAGCTGTAGGAGTACCAATTGCTATCGTTGTTATGGTCTTCATTTTTATCTTTATCTATTTAAGAAGACTAAGGAAGCCAAAGAAAAGGTTTCAAGAAATTCAAGAAGAAGAAGATGAAGAAGACAAAATTGAGATTTCCGAATCCTTGCAATTCGACTTCAACACCATATGTAATGCTACAAATGACTTCTCTGATTTTAATAAACTTGGAGAAGGCGGATTCGGGATTGTTTACAAAGGTAAGCTTGCCAATGGAGAAGAGATTGCTGTCAAAAGGTTGTCGACGACATCTGGACAAGGAGATTCAGAGTTTAAGAACGAGGTGGTTTTAGTGGCTAAACTTCAACACCGAAATTTAGTTAGACTACTCGGCTTCTGTCTAGAAGGAAGAGAAAGAGTACTTGTATATGAGTTTGTTCATAATAAAAGTCTTGATTACTTTATTTTTGATCGAGCTAAGAGAGCACAATTAAATTGGCAATTGCGGTACAAAATCATTTTAGGTATTGCTCGAGGCATTTTATACCTTCACGAGGATTCTCGACTACGCATTATTCATCGTGATCTCAAAGCAAGTAACATTCTCTTAGATGAAGAGATGAATCCTAAGATAGCCGATTTTGGCATGGCAAGACTATTTGTTGTGGACCAAACTCAGGAAAACACAAATAGAATTGTGGGAACCTATGGATATATGGCACCTGAGTACGCAATGCACGGACAATTTTCAGTGAAGTCAGATGTCTTTAGCTTTGGTATATTGGTTCTTGAAATTATAAGTGGTACAAAAAACAGTCGCATTCGTGATGAGGAAAATGAAGAGTATCTCTCGAGCTTTGCATGGAGAAATTGGAAGGAAGGGAGTGCAACAAATATCATAGATCCAACATTAAACAATGATTCAAGAAATGAAATAATTAGATGTATCCACATTGGATTACTATGTGTTCAAGAGAATATAAGTAGTAGACCAACAATGGCTTCTGTTGTAGTGATGCTTAATAGTCATTCTGTCACTCTTCCAATGCCTTTGGAACCTGCATTTCATATGGATTGTGGAAACTCTGAAGATATGAAATCATGGGGTCATAATTCATCAGCTCAAGAATCACTCAATCATGCTTCAAATACAGAGCTATATCCTCGCTAG 2028 0.3743 MTIIPSLLCSLQILLIIIFTSQTKAEPVFDKINLYHYNCDNSNNRGNFTTNSTYHKNLNTLLSTLTSNTQINYGFYNFSHGENLDKVYAIGLCRGDLFPNNCLSCLGSASANLTRVCPNKKEAIFWSEDEKCMLRYSDRLILGVMEDSPKFASSNDNDSVDVVLSNEVVKNLLGNLTSRAMKGDSSLKYAASSLPGPKYEVIYGLVQCTPDLSESDCNSCLGESLFQQIPSCCKNKIGGRVVRPSCNMRFETFLFYEPRASPPPPPPSPPPPATIGSNTTSQGKSNKNSIIGIAVGVPIAIVVMVFIFIFIYLRRLRKPKKRFQEIQEEEDEEDKIEISESLQFDFNTICNATNDFSDFNKLGEGGFGIVYKGKLANGEEIAVKRLSTTSGQGDSEFKNEVVLVAKLQHRNLVRLLGFCLEGRERVLVYEFVHNKSLDYFIFDRAKRAQLNWQLRYKIILGIARGILYLHEDSRLRIIHRDLKASNILLDEEMNPKIADFGMARLFVVDQTQENTNRIVGTYGYMAPEYAMHGQFSVKSDVFSFGILVLEIISGTKNSRIRDEENEEYLSSFAWRNWKEGSATNIIDPTLNNDSRNEIIRCIHIGLLCVQENISSRPTMASVVVMLNSHSVTLPMPLEPAFHMDCGNSEDMKSWGHNSSAQESLNHASNTELYPR* 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3727 675 SMART serkin_6 356 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3727 675 ProSiteProfiles Protein kinase domain profile. 356 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3727 675 SUPERFAMILY Protein kinase-like (PK-like) 339 626 IPR011009 -
Tpr1g3727 675 ProSitePatterns Serine/Threonine protein kinases active-site signature. 477 489 IPR008271 GO:0004672|GO:0006468
Tpr1g3727 675 MobiDBLite consensus disorder prediction 652 675 - -
Tpr1g3727 675 ProSiteProfiles Gnk2-homologous domain profile. 36 141 IPR002902 -
Tpr1g3727 675 Pfam Protein tyrosine and serine/threonine kinase 360 624 IPR001245 GO:0004672|GO:0006468
Tpr1g3727 675 Gene3D - 34 140 IPR038408 -
Tpr1g3727 675 Gene3D - 152 255 IPR038408 -
Tpr1g3727 675 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 12 660 - -
Tpr1g3727 675 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 12 660 - -
Tpr1g3727 675 Gene3D Transferase(Phosphotransferase) domain 1 432 633 - -
Tpr1g3727 675 Pfam Salt stress response/antifungal 168 252 IPR002902 -
Tpr1g3727 675 Pfam Salt stress response/antifungal 39 138 IPR002902 -
Tpr1g3727 675 ProSitePatterns Protein kinases ATP-binding region signature. 362 384 IPR017441 GO:0005524
Tpr1g3727 675 CDD STKc_IRAK 362 627 - -
Tpr1g3727 675 ProSiteProfiles Gnk2-homologous domain profile. 147 255 IPR002902 -
Tpr1g3727 675 Gene3D Phosphorylase Kinase; domain 1 318 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3727 Tpr-Chr1 41387668 41397363 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3727 12 675 Receptor kinase-like Gene Family AT4G21410 49.422 0.0 610
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr1g3727 PK_Tyr_Ser-Thr 4.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3727 - - lang:109335396 775.778