Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3656 ATGGAAAATGGATCACCCTTACTTCATTGTCTCTTGCAACATACTCTAAGGACCTTATGCTCATTTTCTACTTCTTCAACTTCTTCCAAATGGGTCTATGCTGTTTTCTGGAGGGTAGTACCAAGAAATTTTCCTCCACCAAGGTGGGAATTTGGAGGCACTTCTCTTGATCGCTCCAAGGGAAATAAAAGAAATTGGATCATTGTATGGGAAGATGGATTTTGTGATTTTAATGAATGTGAACAAAGGAAAAGTGGATACTTGATTAATGAAATATTTGGAGCTGATGTATTCTTCAAAATGTCTCATGAAGTTTATAGTTATGGAGAAGGACTAGTGGGGAAAGTTGCAGCAGAAAATGGTCACAAATGGATTTATAGTGACACTCAAAATGGAAGTGAATCTAACTATGTTGGTCCATGGAATTCTTCAATTGATCATCAACCAAGAGCATGGGAGTTTCAGTTAAATTCAGGCATTCAGACTATTGCTGTCATTGCTGTCAGAGAAGGCTTAGTACAACTTGGTTCATTCAACAAGATTGCAGAAGATCTTGATTTAGTGCTCAACATACAAAGAAAATTCAGCTACCTCCAAACCATACCAGGAGTGTTTTCAATTCAAAGACAACCACACTTAGCCTTTCAAAATCCATACATTACCAAACCCAACTTCCAAATAATGGAAAGCAATGAAATTTCTAAGAACCAAGTAACCAAACTCAATAATCTGCATGATGAAAGATCCAATTATTTCTCCATGATATCCATAAACTTAGGAAGAAACTTTCCACAAATTGGAACATCAATGTCACCTCTTTGGTCACCTCAACTTTCTTTGCCTAACAATCACATGCAACTTCATGAAACCAATATAACCAATAACACAAGCAAGAAAGTGAAGATTGAAGATGGAACATTTCATATTGCTGATTATGGTCCTAATAACTCCTAA 954 0.3627 MENGSPLLHCLLQHTLRTLCSFSTSSTSSKWVYAVFWRVVPRNFPPPRWEFGGTSLDRSKGNKRNWIIVWEDGFCDFNECEQRKSGYLINEIFGADVFFKMSHEVYSYGEGLVGKVAAENGHKWIYSDTQNGSESNYVGPWNSSIDHQPRAWEFQLNSGIQTIAVIAVREGLVQLGSFNKIAEDLDLVLNIQRKFSYLQTIPGVFSIQRQPHLAFQNPYITKPNFQIMESNEISKNQVTKLNNLHDERSNYFSMISINLGRNFPQIGTSMSPLWSPQLSLPNNHMQLHETNITNNTSKKVKIEDGTFHIADYGPNNS* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3656 317 PANTHER TRANSCRIPTION FACTOR MYC/MYB-RELATED 1 288 - -
Tpr1g3656 317 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 12 195 IPR025610 -
Tpr1g3656 317 PANTHER TRANSCRIPTION FACTOR MYC/MYB-RELATED 1 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3656 Tpr-Chr1 40693468 40696062 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3656 13 199 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 30.851 2.89e-15 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3656 - - cam:101493639 513.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3656 1 40693468 40696062 Tpr1g3656 1 40693468 40696062 ECH