Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3596 ATGTCCCTACCTTTTACAGATCGGAACCGTCGCCGCAACGCCAAACCACATCAAAATCCAGTTCCCGATGCAAAACGCGATGACGTGGAAGGTGGATTCGACGGTTCATCATTCACCGGTGCCGTATTCAACCTTTCAACCACAATTATCGGTGCCGGAATCATGGCTCTTCCTGCTGCCGTCAAACAACTCGGATTGATTCCTGGCTCAATTATGATTATTCTCTGTGCTATTTTAACAGAATTTTCAATTGTTACGCTCTTGAAATTCACACGTGTGTCTAAAACGTCGACGTATTCTGGTGTTGTGAGGGATGCTTTTGGTCGCATTGGTCGATTTCTTTTGTTGATTTCTATTATCTTCAACAATATGGGAATGCTTATTGCCTACATGGTCATTATCGGTGATGTGTTTTCGGGAACGTGGTCGGAAGGAGTCCACTTTACAGGAGTTCTAGAAGAATGGTTTGGTCAGCGTTGGTGGTCAACGCGTCCTATCTTATTGTTGCTCACAACGATTTTTGTTTTTGCGCCTCTCACATCCTTCAGACGTGTAGATTCACTGAGATACACATCAGCATTATCAGTGGCATTGGCTATTGTTTTTGTGGTGATAACAGCAGGTGTTGCAATTGTTAAGTTTGTTGATGGAAGCATTGGGGTGCCAAACTTAATGCCCAAAGTCACTAGCCAAGAATCCTTTTGGAAACTCTTCACTACCGTCCCTATTTTAGTCACTGCATATATCTGTCATCATAATGTGCATCCTATAGAGAATGAACTTAAAGATCCATCCCATATGAATGCAATAGTTCAGACATCACTTTTACTATGCGGATCTGTGTACATAGCGACAAGTATTTTTGGAATTTTATTATTTGGAGACAACATACAAGATGATGTACTTGCAAATTTTGATGGAGATCTTGGAGTTCCTTATGGTACATTTCTTAATGATGTAGTTAGAGTGAGTTATGGAATTCACCTAATCTTAGTGTTCCCAATTGTGTTTTTCTCCCTTAGACTCAACCTAGATGGTCTTTTGTTTCCACATGCCATTCCTCTTGCATTTGACAACAAGAGATTTTGTTTTGTGAGCATAATTCTCATGGCTTTTGTTTTTGTTGGAGCAAATTATGTTCCTAGTATTTGGTATGCCTTCCAATTCACAGGTGCTACGACTACCATTGCTGTTGGTTACATTTTTCCAGCTGCCATTGCTCTTAAGGACAATCGTGGGGTTGCAACAAAAAAAGACAAGTTGTTATCTTTGTTAATTATAGTTTTGGCTGTCTCATGTAGCACTTTAGCCATCTTTAGTGACTTGTATTATAGCACTTTCAGTAAAAAAACAACATTACATGAAGCTTAA 1371 0.3982 MSLPFTDRNRRRNAKPHQNPVPDAKRDDVEGGFDGSSFTGAVFNLSTTIIGAGIMALPAAVKQLGLIPGSIMIILCAILTEFSIVTLLKFTRVSKTSTYSGVVRDAFGRIGRFLLLISIIFNNMGMLIAYMVIIGDVFSGTWSEGVHFTGVLEEWFGQRWWSTRPILLLLTTIFVFAPLTSFRRVDSLRYTSALSVALAIVFVVITAGVAIVKFVDGSIGVPNLMPKVTSQESFWKLFTTVPILVTAYICHHNVHPIENELKDPSHMNAIVQTSLLLCGSVYIATSIFGILLFGDNIQDDVLANFDGDLGVPYGTFLNDVVRVSYGIHLILVFPIVFFSLRLNLDGLLFPHAIPLAFDNKRFCFVSIILMAFVFVGANYVPSIWYAFQFTGATTTIAVGYIFPAAIALKDNRGVATKKDKLLSLLIIVLAVSCSTLAIFSDLYYSTFSKKTTLHEA* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3596 456 MobiDBLite consensus disorder prediction 1 28 - -
Tpr1g3596 456 Pfam Transmembrane amino acid transporter protein 35 437 IPR013057 -
Tpr1g3596 456 PANTHER AMINO ACID TRANSPORTER 15 449 - -
Tpr1g3596 456 MobiDBLite consensus disorder prediction 8 28 - -
Tpr1g3596 456 PANTHER AMINO ACID TRANSPORTER AVT6A 15 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3596 Tpr-Chr1 40115989 40119450 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3596 11 450 Amino Acid or Auxin Permease AAAP Family AT3G30390 54.933 1.94e-176 500
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3596 K14207 - gmx:100814034 665.611