Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3555 ATGTCTTATGCCAATACTACCAAGGTTTGTGACCATTTATCACTAGGTGTATGCCATTGTACATCAACAACAACAATTGGTGAGGCAAAATCCATTGATTCTTCCACCAAGAGGAAACTTGTGGAACAAGCAACTGATGGTGCAACAAAGAAGATAATCAATGATAAGGCTTGGAAGATCAGGAAAGTGTTGAAAAATAGTGATGTTAACCGTTCGAGTAGATTGTTGCTGGGTAAAACATTGGTTGAGGATTTCATGTTGCCTGTGTTGGGTGTTAATGCTATGAAAGAAGAAGAAGAAATTGAAGTTAAAATTTGTGATATCTACACGAACTCCTCCGTGCACTCTCTCAAACTCAAGAGATGGTGTTCAGGAAGCTATGTTTTAAAGGAAGGATGGGCCAAAGGTTTTGTTGCTAGAAAGGGATTACAAAAAGGGGATGAGATTGGCCTTTGTTGGAATCAATACAACCTACACTTCGATTTCTTTGTTCTTTCGTCCAATAAGAATAAGACACTGGATTTAACAAACTATTCAATAACGGAAGTGTGA 552 0.3804 MSYANTTKVCDHLSLGVCHCTSTTTIGEAKSIDSSTKRKLVEQATDGATKKIINDKAWKIRKVLKNSDVNRSSRLLLGKTLVEDFMLPVLGVNAMKEEEEIEVKICDIYTNSSVHSLKLKRWCSGSYVLKEGWAKGFVARKGLQKGDEIGLCWNQYNLHFDFFVLSSNKNKTLDLTNYSITEV* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3555 183 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 31 167 - -
Tpr1g3555 183 Gene3D - 53 173 IPR015300 -
Tpr1g3555 183 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 31 167 - -
Tpr1g3555 183 CDD B3_DNA 58 166 IPR003340 GO:0003677
Tpr1g3555 183 SUPERFAMILY DNA-binding pseudobarrel domain 55 167 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3555 Tpr-Chr1 39712993 39713544 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3555 60 145 B3 DNA Binding Superfamily AT1G20600 39.560 7.79e-06 43.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3555 - - cam:101505348 139.813