Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3530 ATGCATACAATATCAATGATGTTTATTAGTGTAATTTCAAGTGTCCCTTTGTCATCAATAATATTCACTTTGATGGCTTTAATAGGTGGATTATTGGGTTATTTGTATGGGCCATTTTGGAGATTAAGGAAAGTTCCAGGCCCACCTTCTCTTCCTCTTGTAGGACATCTTCCATTACTAGCAAAGTATGGTCCGGATGTGTTCTCAATTCTTGCCAAGCAATATGGCCCAATTTACAGATTTCATATGGGAAGACAACCTCTAATAATCATAGCAGATGCTGAGCTTTGTAAAGAGGTGGGAATAAGAAAATTCAAAGATATCCCAAATAGAAGCATCCCCTCTCCTATCTCTGCTTCTCCTCTTCACCAAAAAGGTTTATTCTTCACAAGGGACTCGCAATGGTCTACAATGAGAAATACCATATTATCAGTATACCAACCATCACACTTAGCAAACTTAGTGCCAAAAATGCAATCATTTATAGAATCAGCAACACAAAATCTTGATGACACCATAAAAGAAGACATAATCTTTTCCAATCTTTCCCTAAGATTAGCAACAGATGTTATTGGAGATGCAGCATTTGGTGTCAACTTTGGTCTCTCAAATCCTAATTCAATTTGTGAATCAATGAAAAGTGTTAATGTAGAAAATTCAAGTGCTAGTAGTAGTGATGAAGTATCAAATTTCATTAATCAACATATTTACTCCACAACACAGCTTAAGATGGATTTGTCTGGTTCATTCTCAATTATAATTGGTTTAATTGCTCCTATACTTCAAGAACCATTTAGACAAATTTTGAAGAGAATAAAGGGCACTATGGATTGGAAAATGGAATGTACTAATAAAAATTTAACCGGTCGTCTTGATGAGATTGTTAAGAAGAGAATGGAAGATAAAAATCGAACTTCGAAGAATTTCTTGTCGCTTATATTGAATGCAAGAGAATCAAAGAGTGTATCAGAGAGTGTGTTTTCATTTGACTACATAAGTGCTATAACTTATGAACACTTACTTGCCGGCTCGGCTACAACATCCTTTACATTGTCATCTATTGTCTATTTGATTGCTGGTCACCTAAATGTTGAGGAAAAATTGCTTCAAGAGATTGATGGGTTTGGAACACATGATAGGATACCTAATGCTAAAGATCTTAATGAAAGTTTTCCTTATCTTGATCAGGTGATTAAAGAGGCAATGAGGATTTACACTGTCTCTCCATTGGTTGCAAGAGAAACATCAAGCGAAGTAGAGATAGGAGGTTACCTTCTTCCAAAGGGAACATGGGTATGGTTAGCACTTGGAGTTCTAGCAAAAGACTCAAGAAACTTTGCAGAACCAGAAAAATTCAAACCAGAGAGGTTTGATCCTAAATGTGAAGAAATGAAAAGAAGGCACCCTTATGCATTCATACCATTTGGAATTGGTCCAAGAGCATGTATTGGCCAGAAATTTTCCATGCAAGAGATCAAACTTACTTTGATTCATTTATATAGAAAATATGTATTTCGTCATTCACTTAATATGGAAAAACCTCTAGAACTTGAATATGGTATGGTTCTCAACTTCAAGCATGGTGTCAAGCTTAGAGTTATAAAAAGAACATAA 1614 0.3532 MHTISMMFISVISSVPLSSIIFTLMALIGGLLGYLYGPFWRLRKVPGPPSLPLVGHLPLLAKYGPDVFSILAKQYGPIYRFHMGRQPLIIIADAELCKEVGIRKFKDIPNRSIPSPISASPLHQKGLFFTRDSQWSTMRNTILSVYQPSHLANLVPKMQSFIESATQNLDDTIKEDIIFSNLSLRLATDVIGDAAFGVNFGLSNPNSICESMKSVNVENSSASSSDEVSNFINQHIYSTTQLKMDLSGSFSIIIGLIAPILQEPFRQILKRIKGTMDWKMECTNKNLTGRLDEIVKKRMEDKNRTSKNFLSLILNARESKSVSESVFSFDYISAITYEHLLAGSATTSFTLSSIVYLIAGHLNVEEKLLQEIDGFGTHDRIPNAKDLNESFPYLDQVIKEAMRIYTVSPLVARETSSEVEIGGYLLPKGTWVWLALGVLAKDSRNFAEPEKFKPERFDPKCEEMKRRHPYAFIPFGIGPRACIGQKFSMQEIKLTLIHLYRKYVFRHSLNMEKPLELEYGMVLNFKHGVKLRVIKRT* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3530 537 PANTHER CYTOCHROME P450 FAMILY PROTEIN 14 537 - -
Tpr1g3530 537 Pfam Cytochrome P450 46 520 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g3530 537 SUPERFAMILY Cytochrome P450 39 536 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g3530 537 PRINTS P450 superfamily signature 342 359 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g3530 537 PRINTS P450 superfamily signature 396 407 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g3530 537 PRINTS P450 superfamily signature 473 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g3530 537 PRINTS P450 superfamily signature 482 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g3530 537 PANTHER THROMBOXANE-A SYNTHASE 14 537 - -
Tpr1g3530 537 Gene3D Cytochrome P450 36 537 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g3530 537 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 475 484 IPR017972 GO:0005506|GO:0016705
Tpr1g3530 537 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g3530 537 PRINTS E-class P450 group I signature 186 204 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g3530 537 PRINTS E-class P450 group I signature 331 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g3530 537 PRINTS E-class P450 group I signature 351 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g3530 537 PRINTS E-class P450 group I signature 395 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g3530 537 PRINTS E-class P450 group I signature 435 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g3530 537 PRINTS E-class P450 group I signature 472 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g3530 537 PRINTS E-class P450 group I signature 482 505 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3530 Tpr-Chr1 39527371 39530804 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3530 83 536 Cytochrome P450 AT2G26170 71.366 0.0 653
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3530 K20771 - gmx:100805689 877.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3530 1 39527371 39530804 Tpr7g0792 7 6980872 6986492 PCT