Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr1g3522 | ATGGCATTTCAATTTGGAGTATTTTGTGTTCTTGCTTTGCTCATTTGTTTCAATGTCAATTCAGTGGATTCAGATGATGGGGCAACATTGTTAGAGATAAAGAAGTCATTCAGAGATGTGGATAATGTTCTATATGATTGGACAGACTCACCAACATCAGATTATTGTGCTTGGAGAGGGGTTTCATGTGATAATGTCACCTTCAATGTTGTTGCACTCAATCTTTCAGGTCTGAATCTTGATGGCGAAATTTCGCCGGCAATAGGGAACCTTGAGAGTTTGGTCTCTATTGATCTTAAAGAAAACCGGTTATCAGGTCAGATACCAGATGAGATTGGTGACTGTTCTTCGTTGAATAGCTTGGACTTGTCATTCAACGAAATACGGGGGGATATACCATTTTCGATATCTAAGCTGAAACAACTGGAAAGTCTGATTTTGAAAAATAATCAGTTAATTGGACCAATTCCTTCAACATTGTCTCAGATTCCTAACTTGAAGATACTGGACCTGGCACAGAATAATCTTAGTGGTGAAATACCAAGGCTTATATACTGGAATGAAGTTTTGCAGTATCTTGGCTTGCGAGGAAACAACTTGGGCGGTTCACTATCTCCGGACATGTGCCAATTAACTGGCTTGTGGTATTTTGATGTGAGAAACAATAGCTTGACAGGAAGTATTCCTGAAAACATAGGAAATTGTACCTCCTTCCAGGTCTTGTATGTAATCCTATTCTATGACTCACTTTTTGCTTCCTTGGTTTATTTTCTTGTTACTTTTTTAACGTCCTTTGTTTATGCCAGGGATTTATCGTACAACCAGTTAACCGGAGAGATTCCATTCAATATCGGATTTCTGCAAATTGCAACCTTGTCATTGCAAGGGAATAAACTTTCGGGACATATTCCCCCGGTGCTCGGTCTCATGCAAGCACTTGCTGTGTTGGACTTGAGTTGTAACATGTTAACCGGATCAATCCCTCCGATTTTGGGTAATTTGACCTACACAGAAAAATTGTACTTGCATGGAAACAAGCTGACGGGCTCCATCCCTCCGGAACTCGGAAATATGTCAAAGCTTCACTATTTGGAACTGAATGATAATCTTCTAAGTGGACATATACCTCCCGAGCTCGGAAAGCTTACCGATCTATTTGACTTAAATGTTGCTAACAACAACCTTGTGGGGCCGATTCCTGGTAATTTAAGCTCATGTACAAACCTTAACAGCCTAAATGTGCATGGGAATAAGCTGAATGGAACAATACCGGCTACTTTTCAGAGCTTGGAGAGTATGACTTCTTTGAATCTCTCATCAAACAACCTCCAAGGCCCCATTCCGATTGAATTGTCACGGATCGGTAATTTGGATACATTGGACATTTCAAACAATAAAATAATTGGACCGATTCCTTCTTCCCTTGGTGACTTGGAACATCTTCTGAAGCTGAATCTCAGCCGAAACAACTTAACAGGACCTATTCCAGCAGAGTTTGGTAATCTTAAAAGTGTTATGGAAATTGATCTTTCTCATAACCAACTCTCTGACTTTATTCCTGTTGAACTTAGTCAACTTCAGAACATAGCATCATTGAGGCTTGAAAACAATGACTTAACTGGGGATGTAGAGTCACTTGAAAATTGTCCAAGTCTTTCTCTGCTGAATGTGTCATATAACAAACTAGTTGGTCTTATTCCCACAAGCAACAACTTTACCAGGTTTTCACCAGATAGTTTCATTGGAAATCCTGGTCTTTGTGGTAACTGGTTGAATTTTCCATGTAAAGGCCCTCATCCTTCAGTACGAGTTACATTATCTAAGGCGGCTATTCTGGGAATTACACTCGGTGCCCTTGTAATTCTTCTTATGATACTTCTGGCTGCTTTCCGACCACACCATCCATCTCCGTTTCCGGATGGATCACTCGACAAACCAGACAAATCAATTACTTTCTCTCCTCCAAAACTAGTGATTCTTCATATGAATATGGCACTTCATGTGTATGACGATATCATGAGGATGACTGAAAACTTGAGTGAGAAGTATATAATTGGAAGTGGTGCATCGAGTACCGTTTATAAATGTGTTCTTAAAAATTGCAAGCCAGTTGCCATAAAGAGGCTCTATTCTCACTATCCACAATACTTGAAAGAATTTGAGACTGAGCTTGCGACCGTCGGCAGCATTAAGCACCGGAATCTGGTCAGTCTCCAAGGCTACTCTTTGTCACCTTATGGCCACCTTCTCTTTTATGACTACATGGAAAATGGCAGTCTCTGGGATCTTCTTCACGGAGCTTGCAAGAAGAAAAAACTTGACTGGAATCTGCGTCTAAAAATAGCACTCGGAGCAGCACAAGGACTTGCATATTTACACCATGATTGCAGTCCTCGCATCATCCACAGAGATGTGAAATCGTCGAACATTTTACTGGATGCAGATTTTGAGCCGCATCTCACGGATTTCGGCATTGCCAAAAGTCTCTGCCCTACAAAGACCCATACTTCTACTTACATAATGGGCACAATTGGCTACATAGATCCGGAGTATGCCAGAACTTCCCGTCTCACTGAGAAATCTGATGTCTACAGCTACGGTATTGTTTTACTTGAATTGCTAACTGGAAGAAAAGCTGTTGACAATGAATCCAACCTCCATCATCTAATTTTGTCCAAGACAGCTAGCAATGCAGTAATGGAAACTGCCGATCCCGATATTACTGCCACGTGCAAGGACCTTGGAGCAGTAAAGAAAGTTTTTCAGCTTGCTCTATTATGCACAAAGAGGCAACCAGCCGATAGGCCAACAATGCACGAAGTTGCGCGTGTATTAGGAAGTCTTGTGCCGTCAATCACACCACCAAAACAACTAACTCTTCCACAGCCTGCATCTCATCCATCCGCCAAAGTTCCGTGCTACATGGATGAGTATGCAAATCTCAAGACACCACACTTGGTGAACTGTCCTTCCATGAGCACCTCGGATGCTCAACTCTTCCTCAAATTCGGAGAAGTAATCTCTCAGAACAGTGAATGA | 3039 | 0.4143 | MAFQFGVFCVLALLICFNVNSVDSDDGATLLEIKKSFRDVDNVLYDWTDSPTSDYCAWRGVSCDNVTFNVVALNLSGLNLDGEISPAIGNLESLVSIDLKENRLSGQIPDEIGDCSSLNSLDLSFNEIRGDIPFSISKLKQLESLILKNNQLIGPIPSTLSQIPNLKILDLAQNNLSGEIPRLIYWNEVLQYLGLRGNNLGGSLSPDMCQLTGLWYFDVRNNSLTGSIPENIGNCTSFQVLYVILFYDSLFASLVYFLVTFLTSFVYARDLSYNQLTGEIPFNIGFLQIATLSLQGNKLSGHIPPVLGLMQALAVLDLSCNMLTGSIPPILGNLTYTEKLYLHGNKLTGSIPPELGNMSKLHYLELNDNLLSGHIPPELGKLTDLFDLNVANNNLVGPIPGNLSSCTNLNSLNVHGNKLNGTIPATFQSLESMTSLNLSSNNLQGPIPIELSRIGNLDTLDISNNKIIGPIPSSLGDLEHLLKLNLSRNNLTGPIPAEFGNLKSVMEIDLSHNQLSDFIPVELSQLQNIASLRLENNDLTGDVESLENCPSLSLLNVSYNKLVGLIPTSNNFTRFSPDSFIGNPGLCGNWLNFPCKGPHPSVRVTLSKAAILGITLGALVILLMILLAAFRPHHPSPFPDGSLDKPDKSITFSPPKLVILHMNMALHVYDDIMRMTENLSEKYIIGSGASSTVYKCVLKNCKPVAIKRLYSHYPQYLKEFETELATVGSIKHRNLVSLQGYSLSPYGHLLFYDYMENGSLWDLLHGACKKKKLDWNLRLKIALGAAQGLAYLHHDCSPRIIHRDVKSSNILLDADFEPHLTDFGIAKSLCPTKTHTSTYIMGTIGYIDPEYARTSRLTEKSDVYSYGIVLLELLTGRKAVDNESNLHHLILSKTASNAVMETADPDITATCKDLGAVKKVFQLALLCTKRQPADRPTMHEVARVLGSLVPSITPPKQLTLPQPASHPSAKVPCYMDEYANLKTPHLVNCPSMSTSDAQLFLKFGEVISQNSE* | 1013 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr1g3522 | 1012 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 800 | 812 | IPR008271 | GO:0004672|GO:0006468 | |
Tpr1g3522 | 1012 | Gene3D | Transferase(Phosphotransferase) domain 1 | 755 | 953 | - | - | |
Tpr1g3522 | 1012 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED | 268 | 999 | - | - | |
Tpr1g3522 | 1012 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED | 8 | 253 | - | - | |
Tpr1g3522 | 1012 | SMART | LRR_typ_2 | 502 | 526 | IPR003591 | - | |
Tpr1g3522 | 1012 | SMART | LRR_typ_2 | 430 | 454 | IPR003591 | - | |
Tpr1g3522 | 1012 | SMART | LRR_typ_2 | 163 | 187 | IPR003591 | - | |
Tpr1g3522 | 1012 | SMART | LRR_typ_2 | 358 | 382 | IPR003591 | - | |
Tpr1g3522 | 1012 | SMART | LRR_typ_2 | 211 | 235 | IPR003591 | - | |
Tpr1g3522 | 1012 | SMART | LRR_typ_2 | 91 | 115 | IPR003591 | - | |
Tpr1g3522 | 1012 | SMART | LRR_typ_2 | 310 | 334 | IPR003591 | - | |
Tpr1g3522 | 1012 | SMART | LRR_typ_2 | 478 | 501 | IPR003591 | - | |
Tpr1g3522 | 1012 | Gene3D | Ribonuclease Inhibitor | 189 | 251 | IPR032675 | - | |
Tpr1g3522 | 1012 | ProSiteProfiles | Protein kinase domain profile. | 679 | 952 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr1g3522 | 1012 | Pfam | Protein kinase domain | 682 | 942 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr1g3522 | 1012 | SUPERFAMILY | RNI-like | 52 | 328 | - | - | |
Tpr1g3522 | 1012 | Gene3D | Ribonuclease Inhibitor | 257 | 597 | IPR032675 | - | |
Tpr1g3522 | 1012 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ERECTA | 8 | 253 | - | - | |
Tpr1g3522 | 1012 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ERECTA | 268 | 999 | - | - | |
Tpr1g3522 | 1012 | Coils | Coil | 529 | 549 | - | - | |
Tpr1g3522 | 1012 | Gene3D | Phosphorylase Kinase; domain 1 | 651 | 754 | - | - | |
Tpr1g3522 | 1012 | SUPERFAMILY | Protein kinase-like (PK-like) | 657 | 945 | IPR011009 | - | |
Tpr1g3522 | 1012 | CDD | STKc_IRAK | 685 | 948 | - | - | |
Tpr1g3522 | 1012 | SMART | serkin_6 | 679 | 945 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr1g3522 | 1012 | ProSitePatterns | Protein kinases ATP-binding region signature. | 685 | 707 | IPR017441 | GO:0005524 | |
Tpr1g3522 | 1012 | Pfam | Leucine rich repeat | 480 | 539 | IPR001611 | GO:0005515 | |
Tpr1g3522 | 1012 | Pfam | Leucine rich repeat | 407 | 467 | IPR001611 | GO:0005515 | |
Tpr1g3522 | 1012 | Pfam | Leucine rich repeat | 117 | 176 | IPR001611 | GO:0005515 | |
Tpr1g3522 | 1012 | ProSiteProfiles | Leucine-rich repeat profile. | 165 | 187 | IPR001611 | GO:0005515 | |
Tpr1g3522 | 1012 | Pfam | Leucine rich repeat N-terminal domain | 24 | 64 | IPR013210 | - | |
Tpr1g3522 | 1012 | Gene3D | Ribonuclease Inhibitor | 23 | 188 | IPR032675 | - | |
Tpr1g3522 | 1012 | SUPERFAMILY | L domain-like | 260 | 591 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr1g3522 | Tpr-Chr1 | 39422603 | 39430670 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr1g3522 | 287 | 593 | Receptor kinase-like Gene Family | AT5G07180 | 35.398 | 3.37e-43 | 168 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XIIIb | Tpr1g3522 | Pkinase | 1.1e-43 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr1g3522 | K20718 | - | gmx:100782307 | 1726.06 |