Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3522 ATGGCATTTCAATTTGGAGTATTTTGTGTTCTTGCTTTGCTCATTTGTTTCAATGTCAATTCAGTGGATTCAGATGATGGGGCAACATTGTTAGAGATAAAGAAGTCATTCAGAGATGTGGATAATGTTCTATATGATTGGACAGACTCACCAACATCAGATTATTGTGCTTGGAGAGGGGTTTCATGTGATAATGTCACCTTCAATGTTGTTGCACTCAATCTTTCAGGTCTGAATCTTGATGGCGAAATTTCGCCGGCAATAGGGAACCTTGAGAGTTTGGTCTCTATTGATCTTAAAGAAAACCGGTTATCAGGTCAGATACCAGATGAGATTGGTGACTGTTCTTCGTTGAATAGCTTGGACTTGTCATTCAACGAAATACGGGGGGATATACCATTTTCGATATCTAAGCTGAAACAACTGGAAAGTCTGATTTTGAAAAATAATCAGTTAATTGGACCAATTCCTTCAACATTGTCTCAGATTCCTAACTTGAAGATACTGGACCTGGCACAGAATAATCTTAGTGGTGAAATACCAAGGCTTATATACTGGAATGAAGTTTTGCAGTATCTTGGCTTGCGAGGAAACAACTTGGGCGGTTCACTATCTCCGGACATGTGCCAATTAACTGGCTTGTGGTATTTTGATGTGAGAAACAATAGCTTGACAGGAAGTATTCCTGAAAACATAGGAAATTGTACCTCCTTCCAGGTCTTGTATGTAATCCTATTCTATGACTCACTTTTTGCTTCCTTGGTTTATTTTCTTGTTACTTTTTTAACGTCCTTTGTTTATGCCAGGGATTTATCGTACAACCAGTTAACCGGAGAGATTCCATTCAATATCGGATTTCTGCAAATTGCAACCTTGTCATTGCAAGGGAATAAACTTTCGGGACATATTCCCCCGGTGCTCGGTCTCATGCAAGCACTTGCTGTGTTGGACTTGAGTTGTAACATGTTAACCGGATCAATCCCTCCGATTTTGGGTAATTTGACCTACACAGAAAAATTGTACTTGCATGGAAACAAGCTGACGGGCTCCATCCCTCCGGAACTCGGAAATATGTCAAAGCTTCACTATTTGGAACTGAATGATAATCTTCTAAGTGGACATATACCTCCCGAGCTCGGAAAGCTTACCGATCTATTTGACTTAAATGTTGCTAACAACAACCTTGTGGGGCCGATTCCTGGTAATTTAAGCTCATGTACAAACCTTAACAGCCTAAATGTGCATGGGAATAAGCTGAATGGAACAATACCGGCTACTTTTCAGAGCTTGGAGAGTATGACTTCTTTGAATCTCTCATCAAACAACCTCCAAGGCCCCATTCCGATTGAATTGTCACGGATCGGTAATTTGGATACATTGGACATTTCAAACAATAAAATAATTGGACCGATTCCTTCTTCCCTTGGTGACTTGGAACATCTTCTGAAGCTGAATCTCAGCCGAAACAACTTAACAGGACCTATTCCAGCAGAGTTTGGTAATCTTAAAAGTGTTATGGAAATTGATCTTTCTCATAACCAACTCTCTGACTTTATTCCTGTTGAACTTAGTCAACTTCAGAACATAGCATCATTGAGGCTTGAAAACAATGACTTAACTGGGGATGTAGAGTCACTTGAAAATTGTCCAAGTCTTTCTCTGCTGAATGTGTCATATAACAAACTAGTTGGTCTTATTCCCACAAGCAACAACTTTACCAGGTTTTCACCAGATAGTTTCATTGGAAATCCTGGTCTTTGTGGTAACTGGTTGAATTTTCCATGTAAAGGCCCTCATCCTTCAGTACGAGTTACATTATCTAAGGCGGCTATTCTGGGAATTACACTCGGTGCCCTTGTAATTCTTCTTATGATACTTCTGGCTGCTTTCCGACCACACCATCCATCTCCGTTTCCGGATGGATCACTCGACAAACCAGACAAATCAATTACTTTCTCTCCTCCAAAACTAGTGATTCTTCATATGAATATGGCACTTCATGTGTATGACGATATCATGAGGATGACTGAAAACTTGAGTGAGAAGTATATAATTGGAAGTGGTGCATCGAGTACCGTTTATAAATGTGTTCTTAAAAATTGCAAGCCAGTTGCCATAAAGAGGCTCTATTCTCACTATCCACAATACTTGAAAGAATTTGAGACTGAGCTTGCGACCGTCGGCAGCATTAAGCACCGGAATCTGGTCAGTCTCCAAGGCTACTCTTTGTCACCTTATGGCCACCTTCTCTTTTATGACTACATGGAAAATGGCAGTCTCTGGGATCTTCTTCACGGAGCTTGCAAGAAGAAAAAACTTGACTGGAATCTGCGTCTAAAAATAGCACTCGGAGCAGCACAAGGACTTGCATATTTACACCATGATTGCAGTCCTCGCATCATCCACAGAGATGTGAAATCGTCGAACATTTTACTGGATGCAGATTTTGAGCCGCATCTCACGGATTTCGGCATTGCCAAAAGTCTCTGCCCTACAAAGACCCATACTTCTACTTACATAATGGGCACAATTGGCTACATAGATCCGGAGTATGCCAGAACTTCCCGTCTCACTGAGAAATCTGATGTCTACAGCTACGGTATTGTTTTACTTGAATTGCTAACTGGAAGAAAAGCTGTTGACAATGAATCCAACCTCCATCATCTAATTTTGTCCAAGACAGCTAGCAATGCAGTAATGGAAACTGCCGATCCCGATATTACTGCCACGTGCAAGGACCTTGGAGCAGTAAAGAAAGTTTTTCAGCTTGCTCTATTATGCACAAAGAGGCAACCAGCCGATAGGCCAACAATGCACGAAGTTGCGCGTGTATTAGGAAGTCTTGTGCCGTCAATCACACCACCAAAACAACTAACTCTTCCACAGCCTGCATCTCATCCATCCGCCAAAGTTCCGTGCTACATGGATGAGTATGCAAATCTCAAGACACCACACTTGGTGAACTGTCCTTCCATGAGCACCTCGGATGCTCAACTCTTCCTCAAATTCGGAGAAGTAATCTCTCAGAACAGTGAATGA 3039 0.4143 MAFQFGVFCVLALLICFNVNSVDSDDGATLLEIKKSFRDVDNVLYDWTDSPTSDYCAWRGVSCDNVTFNVVALNLSGLNLDGEISPAIGNLESLVSIDLKENRLSGQIPDEIGDCSSLNSLDLSFNEIRGDIPFSISKLKQLESLILKNNQLIGPIPSTLSQIPNLKILDLAQNNLSGEIPRLIYWNEVLQYLGLRGNNLGGSLSPDMCQLTGLWYFDVRNNSLTGSIPENIGNCTSFQVLYVILFYDSLFASLVYFLVTFLTSFVYARDLSYNQLTGEIPFNIGFLQIATLSLQGNKLSGHIPPVLGLMQALAVLDLSCNMLTGSIPPILGNLTYTEKLYLHGNKLTGSIPPELGNMSKLHYLELNDNLLSGHIPPELGKLTDLFDLNVANNNLVGPIPGNLSSCTNLNSLNVHGNKLNGTIPATFQSLESMTSLNLSSNNLQGPIPIELSRIGNLDTLDISNNKIIGPIPSSLGDLEHLLKLNLSRNNLTGPIPAEFGNLKSVMEIDLSHNQLSDFIPVELSQLQNIASLRLENNDLTGDVESLENCPSLSLLNVSYNKLVGLIPTSNNFTRFSPDSFIGNPGLCGNWLNFPCKGPHPSVRVTLSKAAILGITLGALVILLMILLAAFRPHHPSPFPDGSLDKPDKSITFSPPKLVILHMNMALHVYDDIMRMTENLSEKYIIGSGASSTVYKCVLKNCKPVAIKRLYSHYPQYLKEFETELATVGSIKHRNLVSLQGYSLSPYGHLLFYDYMENGSLWDLLHGACKKKKLDWNLRLKIALGAAQGLAYLHHDCSPRIIHRDVKSSNILLDADFEPHLTDFGIAKSLCPTKTHTSTYIMGTIGYIDPEYARTSRLTEKSDVYSYGIVLLELLTGRKAVDNESNLHHLILSKTASNAVMETADPDITATCKDLGAVKKVFQLALLCTKRQPADRPTMHEVARVLGSLVPSITPPKQLTLPQPASHPSAKVPCYMDEYANLKTPHLVNCPSMSTSDAQLFLKFGEVISQNSE* 1013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3522 1012 ProSitePatterns Serine/Threonine protein kinases active-site signature. 800 812 IPR008271 GO:0004672|GO:0006468
Tpr1g3522 1012 Gene3D Transferase(Phosphotransferase) domain 1 755 953 - -
Tpr1g3522 1012 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 268 999 - -
Tpr1g3522 1012 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 8 253 - -
Tpr1g3522 1012 SMART LRR_typ_2 502 526 IPR003591 -
Tpr1g3522 1012 SMART LRR_typ_2 430 454 IPR003591 -
Tpr1g3522 1012 SMART LRR_typ_2 163 187 IPR003591 -
Tpr1g3522 1012 SMART LRR_typ_2 358 382 IPR003591 -
Tpr1g3522 1012 SMART LRR_typ_2 211 235 IPR003591 -
Tpr1g3522 1012 SMART LRR_typ_2 91 115 IPR003591 -
Tpr1g3522 1012 SMART LRR_typ_2 310 334 IPR003591 -
Tpr1g3522 1012 SMART LRR_typ_2 478 501 IPR003591 -
Tpr1g3522 1012 Gene3D Ribonuclease Inhibitor 189 251 IPR032675 -
Tpr1g3522 1012 ProSiteProfiles Protein kinase domain profile. 679 952 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3522 1012 Pfam Protein kinase domain 682 942 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3522 1012 SUPERFAMILY RNI-like 52 328 - -
Tpr1g3522 1012 Gene3D Ribonuclease Inhibitor 257 597 IPR032675 -
Tpr1g3522 1012 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ERECTA 8 253 - -
Tpr1g3522 1012 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ERECTA 268 999 - -
Tpr1g3522 1012 Coils Coil 529 549 - -
Tpr1g3522 1012 Gene3D Phosphorylase Kinase; domain 1 651 754 - -
Tpr1g3522 1012 SUPERFAMILY Protein kinase-like (PK-like) 657 945 IPR011009 -
Tpr1g3522 1012 CDD STKc_IRAK 685 948 - -
Tpr1g3522 1012 SMART serkin_6 679 945 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3522 1012 ProSitePatterns Protein kinases ATP-binding region signature. 685 707 IPR017441 GO:0005524
Tpr1g3522 1012 Pfam Leucine rich repeat 480 539 IPR001611 GO:0005515
Tpr1g3522 1012 Pfam Leucine rich repeat 407 467 IPR001611 GO:0005515
Tpr1g3522 1012 Pfam Leucine rich repeat 117 176 IPR001611 GO:0005515
Tpr1g3522 1012 ProSiteProfiles Leucine-rich repeat profile. 165 187 IPR001611 GO:0005515
Tpr1g3522 1012 Pfam Leucine rich repeat N-terminal domain 24 64 IPR013210 -
Tpr1g3522 1012 Gene3D Ribonuclease Inhibitor 23 188 IPR032675 -
Tpr1g3522 1012 SUPERFAMILY L domain-like 260 591 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3522 Tpr-Chr1 39422603 39430670 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3522 287 593 Receptor kinase-like Gene Family AT5G07180 35.398 3.37e-43 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Tpr1g3522 Pkinase 1.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3522 K20718 - gmx:100782307 1726.06