Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3509 ATGAGTTGTTGCACTAACAAAATGACAGAGAGAAATCCAATAGCAGCAAATTCATCATCACCTGACAGTGATTTTAGCAACCAATGGTGTTTGGAACTCTCCGACTACATGAATTTAGATGATCACAACCAATGGTTACAAATTGATCCTACAATTGAACAGTCTTTTGTTTATCAGGCTAATGAAGCAGGAGATACTAATACCACTACTATGAGTGTTAAAGAGAGAGTTGCATTCAAAACAAAGTCAGAGATTGAAGTACTTGATGATGGTTATAGATGGAGGAAATATGGAAAGAAAATGGTCAAGAATAGCCCCAATCCAAGGAACTATTATAGGTGTTCAGTAGAGGGATGTCCTGTTAAAAAGAGAGTTGAAAGAGATAAAGATGATATAAAGTATGTGATAACAACCTATGAAGGCATGCACACCCACCCAAATTCTTGCTAG 450 0.3667 MSCCTNKMTERNPIAANSSSPDSDFSNQWCLELSDYMNLDDHNQWLQIDPTIEQSFVYQANEAGDTNTTTMSVKERVAFKTKSEIEVLDDGYRWRKYGKKMVKNSPNPRNYYRCSVEGCPVKKRVERDKDDIKYVITTYEGMHTHPNSC* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3509 149 ProSiteProfiles WRKY domain profile. 83 148 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr1g3509 149 MobiDBLite consensus disorder prediction 1 20 - -
Tpr1g3509 149 SMART WRKY_cls 88 147 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr1g3509 149 Pfam WRKY DNA -binding domain 89 146 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr1g3509 149 Gene3D WRKY domain 75 141 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr1g3509 149 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 8 63 - -
Tpr1g3509 149 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 72 148 - -
Tpr1g3509 149 SUPERFAMILY WRKY DNA-binding domain 81 146 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr1g3509 149 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 8 63 IPR044810 GO:0003700
Tpr1g3509 149 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 72 148 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3509 Tpr-Chr1 39278726 39279945 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3509 76 145 WRKY Transcription Factor Family AT5G26170 81.429 1.62e-41 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tpr1g3509 WRKY 5.3e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3509 - - gmx:100819462 174.096