Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3505 ATGATGTCTTCTTATGGAAGCAAAAAAACACATACAAACCTTGTTATGGTGGCTGTAGACAAAGACAAGAATAGTGGTTATGCCTATCATTGGACAACTAATAATATTGAAAACCCTATCATCATTGCAGTCCATGTTAAACACAAAGACCTTCCTCATCAGGGTTCCAATGTTTTCCCCCCTGATGAAGAAGATGTAGACAATGTGTTTAGTACCTTGCGTGAAATGTGTAATGATAAAGTTGTAAAGATGAAAGAAGCTGTAGTCGATGATAGTGATATTGCTAGAGGACTTTTGGATTATGCAAAGAGGAATCGCATTCAAACTATCATTGTTGGTGCACCCGCAAGCTACACCAAAAATGTTCTATCAAGATCTCTAAACATGAGAACTATAAGCAAAAGGTTTAAAGGATATGAGGATATAGCAACAACCATAATTAAATCAGCTCCAGATTATAGTTCTGTCTATGTAATTGCAAAAGGAAAGGTAGTGGAAACTCGACCAGCAATAAGACCATTGGATAATTTAGATGTAAAATCACCTGCAATGACAGTTTGTAAATCAGAGAATGATATAAGGGGACCAATATTTAAAAGAGGAGCTAGCACTAGTAGATCACGAAGAGGACTACTTTTGCTTTCAACTAATCAATCTTTGGAGAGCATTGATTTATCAAATCATCATAGCCAAAAGTCACAATTATTTAGCCATAACTCAAGCTTAAATGAAAATAACTCATCCGGGTCACATAAATTTGGTTCATTGGGTTTACCAAAATTAGATAAGGATTCAAGCAATGAAGCAGATTCTCAACACAAAGAAGAGATGGAAGCTGAGATGAAAGAATTGAGGCTCAAACTTAGGCAGACTATGGACATGTACAAGTCAGCTTGCAAAGAAGCAATCACTGCCAAAAACAAGGCTAAAGAAATTAATCAATGGAAACTTGAAGAAGCACGTACTGTTGAGGAAGTTATGATGTCAAAAGAAGCAGCATTAGCAATGGCAGAAAAGGAAAAAGCTAAAGCAAAAGCTGCAATTCAAGAAGCTGATGAAGCTATGAAAAAGGCAGAAAAAGAAGCACAAAGAAGATTAAAGGCAGAGAGAAAGGCTAGAAGAGAAATGGAAGAGAAAGATCAAGCACTAAATGTTATAGCTCGTAAAGATATTCGATATAGACAATACACCTTAGAAGAAATTGAAAATGCTACTCAAAATTTCTCATTATCAATGAAAATTGGTGAAGGTGGATATGGACCTGTTTTTAAAGGTCAACTTGATCATACAAATGTTGCTATCAAAGTTTTAAGACCTGATGCTAACCAGGGTAGAAAACAGTTCCTACAAGAGGTTGAGATATTGTGCAACATAAGACATCCAAATATGGTCCTTCTCCTAGGTGCATGTCAAGAATATGGATGCTTAGTATATGAATACATGGACAATGGTAGCTTGGAAGACAGATTATTAAGAAAACAAAACAGCCCTCCAATTCCATGGCAAAATCGTTTCGAAATAGCATTTGAAATTGCAACAGCACTTCTTTTCCTTCACCAAACAAAGCCAGAAGCCATTGTTCATAGAGACCTTAAACCAGCCAACATTCTCATTGACAAAAATTTTGTTAGCAAAATAAGTGATGTTGGTTTATCAAGATTAGTACCACCTTGTGTAGCGGATTCCGTCACACAATATCATATGACTTCAGCAGCTGGAACATTATCTTACATTGATCCCGAGTATCAGCAATCCGGAAAATTAACAACAAAATCAGATATTTATTCTTTAGGGATAGTGTTTCTTCAAATAATCACAGCTAAACCTCCAATGGGACTTTCTCATCAAGTTAAAAGGGCTATTGAAAATGGAACATTTTCTGATATGCTTGATCCTGTTGTTACTGATTGGCCTATTGATGAAGTTTTGGAATTTGCTAAACTTGCTTTGAGATGTGCTGAGCTTTGTAAGAAAGATAGACCTGATCTTGCATTAGAAGTGATTCCGGAGCTTAATAGATTAAAAGAGTTTGGATTTAAGTCACAAAAATACGAACGAAATCGGAGTCATGCACTGCGTCCTCCCGCGCCTCCTCGAGGTCCACTTTGA 2109 0.3646 MMSSYGSKKTHTNLVMVAVDKDKNSGYAYHWTTNNIENPIIIAVHVKHKDLPHQGSNVFPPDEEDVDNVFSTLREMCNDKVVKMKEAVVDDSDIARGLLDYAKRNRIQTIIVGAPASYTKNVLSRSLNMRTISKRFKGYEDIATTIIKSAPDYSSVYVIAKGKVVETRPAIRPLDNLDVKSPAMTVCKSENDIRGPIFKRGASTSRSRRGLLLLSTNQSLESIDLSNHHSQKSQLFSHNSSLNENNSSGSHKFGSLGLPKLDKDSSNEADSQHKEEMEAEMKELRLKLRQTMDMYKSACKEAITAKNKAKEINQWKLEEARTVEEVMMSKEAALAMAEKEKAKAKAAIQEADEAMKKAEKEAQRRLKAERKARREMEEKDQALNVIARKDIRYRQYTLEEIENATQNFSLSMKIGEGGYGPVFKGQLDHTNVAIKVLRPDANQGRKQFLQEVEILCNIRHPNMVLLLGACQEYGCLVYEYMDNGSLEDRLLRKQNSPPIPWQNRFEIAFEIATALLFLHQTKPEAIVHRDLKPANILIDKNFVSKISDVGLSRLVPPCVADSVTQYHMTSAAGTLSYIDPEYQQSGKLTTKSDIYSLGIVFLQIITAKPPMGLSHQVKRAIENGTFSDMLDPVVTDWPIDEVLEFAKLALRCAELCKKDRPDLALEVIPELNRLKEFGFKSQKYERNRSHALRPPAPPRGPL* 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3505 702 SMART serkin_6 408 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3505 702 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 9 700 - -
Tpr1g3505 702 MobiDBLite consensus disorder prediction 256 278 - -
Tpr1g3505 702 MobiDBLite consensus disorder prediction 231 250 - -
Tpr1g3505 702 Coils Coil 327 379 - -
Tpr1g3505 702 PANTHER OS02G0152300 PROTEIN 9 700 - -
Tpr1g3505 702 Gene3D Phosphorylase Kinase; domain 1 385 480 - -
Tpr1g3505 702 SUPERFAMILY Protein kinase-like (PK-like) 390 663 IPR011009 -
Tpr1g3505 702 ProSitePatterns Serine/Threonine protein kinases active-site signature. 526 538 IPR008271 GO:0004672|GO:0006468
Tpr1g3505 702 MobiDBLite consensus disorder prediction 263 278 - -
Tpr1g3505 702 Pfam Protein kinase domain 410 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3505 702 Pfam Universal stress protein family 15 116 IPR006016 -
Tpr1g3505 702 Coils Coil 267 294 - -
Tpr1g3505 702 CDD STK_N 14 162 - -
Tpr1g3505 702 Gene3D Transferase(Phosphotransferase) domain 1 481 691 - -
Tpr1g3505 702 Gene3D HUPs 3 130 IPR014729 -
Tpr1g3505 702 ProSiteProfiles Protein kinase domain profile. 408 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3505 Tpr-Chr1 39246747 39251592 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3505 84 678 Receptor kinase-like Gene Family AT5G12000 55.987 0.0 648
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Tpr1g3505 Pkinase 2.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3505 - - gmx:100786386 788.875