Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3486 ATGAGGAGTACACCCACCACAATGCTAAACACACACCCCAACAATACCCACACAAGTACTATTAATCACTCATTATGGCAAACTCCAATCCCATATCTCTTTGGAGGACTAGCTGCCATTATGGGTCTAATAGCCTTGGCATTGTTGGCACTATCTTGCTCTCACTGTAAACTCTCAAGGAACAACCAAGATGAGGACCACAATGACTTGGACAACAAAGAGAGTGACCCTCAAACTAAGGAATCCATCAAGGCCTACGAAGAGAAGGTCCTTGTTATTATGGCTGGGAATGAAAAACCAACATTCTTGGCTACCCCTGTAGTTTTGTCCATTATTGACAGAGAAATTGATAACCTTGTACTTGTTCCAGCTACTTCTACTCCACAAGAAAATCAAGGCTCTTGCTCTTCACAGCATACTCAAATGGTTTAG 432 0.4236 MRSTPTTMLNTHPNNTHTSTINHSLWQTPIPYLFGGLAAIMGLIALALLALSCSHCKLSRNNQDEDHNDLDNKESDPQTKESIKAYEEKVLVIMAGNEKPTFLATPVVLSIIDREIDNLVLVPATSTPQENQGSCSSQHTQMV* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3486 143 MobiDBLite consensus disorder prediction 60 81 - -
Tpr1g3486 143 PANTHER DUMPER, PUTATIVE-RELATED 1 141 - -
Tpr1g3486 143 PANTHER PROTEIN GLUTAMINE DUMPER 4-RELATED 1 141 IPR040359 GO:0080143
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3486 Tpr-Chr1 39065133 39066269 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3486 18 108 Glutamine Dumper (GDU) Family AT4G31730 48.454 6.44e-28 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3486 - - mtr:MTR_1g013410 214.542