Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3483 ATGGCATTTCTCCCTCAGGTTCATTCTGCTGATGATTCACCTGTTAGTGGTGGGGGACTCAGTCAGAATGGAAAATTCAGCTATGGATATGCTAGCTCCCCCGGCAAAAGATCTTCAATGGAAGATTTTTATGAGACAAGAATTGACGGTGTTGATGGTGAAGTTGTTGGCCTTTTTGGAGTTTTTGACGGTCACGGCGGTGCTCGTGCTGCTGAGTATGTCAAACAAAACCTATTTAGTAATTTGATCAGCCATCCAAAATTCATTTCTGACACCAAATCTGCAATAGCTGATGCGTATACGCACACCGACTCTGAATTTCTGAAATCAGAAAATAATCAAAACCGAGATGCTGGATCTACTGCTTCCACTGCCATTCTTGTTGGTGACCGTTTGATTGTGGCAAATGTTGGCGACTCCAGAGCTGTTATATGCAGGGGCGGAAACGCAATTGCTGTGTCCCGAGATCACAAACCAGATCAAACCGATGAGAGGCAAAGGATAGAGGATGCAGGGGGATTTGTTATGTGGGCTGGAACTTGGAGAGTTGGTGGTGTTCTTGCTGTTTCTCGCGCATTTGGTGATAGACTACTTAAGCAATACGTTGTTGCTGATCCGGAAATCCAGGAAGAAAAGGTTGATAGCTCTCTCGAGTTTCTTATATTAGCCAGTGACGGGCTATGGGATGTTGTCTCAAATGAGGAAGCTGTTGCTATGATTAAACCGATTGAGGACGCAGAGGAGGCAGCTAAGAGGCTGATGAAAGAAGCATATCAAAGAGGTAGTTCTGACAACATTACTTGTGTCGTCGTTCGTTTCATATTGAACAACCAAGGTTCTTCTTCTCGTAATAGCTCTGGCTAA 864 0.4444 MAFLPQVHSADDSPVSGGGLSQNGKFSYGYASSPGKRSSMEDFYETRIDGVDGEVVGLFGVFDGHGGARAAEYVKQNLFSNLISHPKFISDTKSAIADAYTHTDSEFLKSENNQNRDAGSTASTAILVGDRLIVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKVDSSLEFLILASDGLWDVVSNEEAVAMIKPIEDAEEAAKRLMKEAYQRGSSDNITCVVVRFILNNQGSSSRNSSG* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3483 287 SMART PP2C_4 17 271 IPR001932 -
Tpr1g3483 287 CDD PP2Cc 26 273 IPR001932 -
Tpr1g3483 287 Gene3D - 19 277 IPR036457 -
Tpr1g3483 287 ProSitePatterns PPM-type phosphatase domain signature. 58 66 IPR000222 GO:0043169
Tpr1g3483 287 SMART PP2C_SIG_2 22 273 IPR001932 -
Tpr1g3483 287 SUPERFAMILY PP2C-like 21 273 IPR036457 -
Tpr1g3483 287 PANTHER ALPHABET, ISOFORM E-RELATED 6 281 - -
Tpr1g3483 287 PANTHER PHYTOCHROME-ASSOCIATED PROTEIN PHOSPHATASE TYPE 2C 6 281 - -
Tpr1g3483 287 Pfam Protein phosphatase 2C 55 266 IPR001932 -
Tpr1g3483 287 ProSiteProfiles PPM-type phosphatase domain profile. 27 273 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3483 Tpr-Chr1 39052169 39056791 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3483 6 284 PP2C-type Phosphatase Gene Family AT4G31750 90.426 0.0 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3483 K17506 - gmx:547661 523.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3483 1 39052169 39056791 Tpr1g3483 1 39052169 39056791 ECH