Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3465 ATGGAGGAGGTGAAGGCAATCATGTTATTTGGCAAGTACGAGATGGGAAGAATACTAGGTAAAGGAACATTTGCAAAAGTGTACTATGCCAAAGAAATTGCTACGGGTGAAGGTGTAGCAATTAAAGTTATAGACAAAGACAAAGTGAGAAAAGAAGGCATGATGGAACAAATCAAACGGGAAATTTCAGTGATGAGGTTAGTAAAACATCCAAACATTGTCAACCTTAAAGAAGTCATGGCAACAAAGACAAAAATCTTGTTCGTCATGGAATATGCACGTGGCGGTGAATTATTCGATAAAGTTGCGAAAGGTAAATTTAAAGAAGAACTTGCTAGGAAGTATTTTCAACAACTTATAAGCGCGGTTGATTATTGTCATAGTAGAGGCGTTTCACACCGCGATTTGAAACCGGAAAATTTGTTACTTGATGAAAACGGTGATCTTAAGGTGTCTGATTTCGGACTCTCTGCTTTGCCTGAACAACTTCGTCAGGACGGACTTTTACATACTCAATGTGGAACTCCTGCTTACGTGGCACCCGAGGTAGTTAGAAAAAGAGGTTATAACGGCTTTAAAGCCGATACTTGGTCATGTGGTGTTATTCTTTATGCTTTACTTGCTGGATTTTTACCTTTTCAACATGAAAATTTAATGTCCATGTATAATAAAGTTTTCAAAGAAGAGTATCAATTTCCACCTTGGTTTTCGCCTGAATCAAAGAGATTAATCTCGAAGATTTTAGTAGCTGATCCAGAAAGAAGAATCACAATTCCTTCAATCATGAATGTTCCATGGTTTCGAAAAGGTTTATCGTCACTATCAACAATTACTACTTCAAATGATGAAGTAGAATTTGAATCAAAGGTAATTGATTCTTCTCCACCACAATTTTTCAATGCGTTCGATTTTATTTCTTCGATGTCTTCGGGGTTTGATCTTTCGGGTTTGTTCGAGGAAAAGAAAAAAAGGGATTCGGTTTTTACTTCAAAGTGTTCGGTTTCGGAGATTGTGACAAAAATCGAAAGTGCTGCGAAAAATTTAAAGTTTAAGGTTAAGAAGGTTAAAGATTTTAAACTGAAGCTACAAGGGTCTTTTGAAGGGAGAAAAGGAAAGTTAACCGTGTCGGCGGAGATATACGAGGTGGCGCCGGAGCTTGCGGTGGTTGAGTTTTCCAAGAGTTCCGGTGATACTTTTGAATATGTTAAGGTGTTTGAAGAAGATGTTAGGCCTGCTCTCAAAGACATTGTTTGGTCATGGCAAGGGGAATGA 1272 0.3797 MEEVKAIMLFGKYEMGRILGKGTFAKVYYAKEIATGEGVAIKVIDKDKVRKEGMMEQIKREISVMRLVKHPNIVNLKEVMATKTKILFVMEYARGGELFDKVAKGKFKEELARKYFQQLISAVDYCHSRGVSHRDLKPENLLLDENGDLKVSDFGLSALPEQLRQDGLLHTQCGTPAYVAPEVVRKRGYNGFKADTWSCGVILYALLAGFLPFQHENLMSMYNKVFKEEYQFPPWFSPESKRLISKILVADPERRITIPSIMNVPWFRKGLSSLSTITTSNDEVEFESKVIDSSPPQFFNAFDFISSMSSGFDLSGLFEEKKKRDSVFTSKCSVSEIVTKIESAAKNLKFKVKKVKDFKLKLQGSFEGRKGKLTVSAEIYEVAPELAVVEFSKSSGDTFEYVKVFEEDVRPALKDIVWSWQGE* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3465 423 Pfam NAF domain 296 354 IPR004041 GO:0007165
Tpr1g3465 423 CDD CIPK_C 300 414 - -
Tpr1g3465 423 CDD STKc_SnRK3 12 266 - -
Tpr1g3465 423 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 25-RELATED 2 423 - -
Tpr1g3465 423 ProSiteProfiles NAF domain profile. 294 319 IPR018451 GO:0007165
Tpr1g3465 423 Gene3D Transferase(Phosphotransferase) domain 1 93 272 - -
Tpr1g3465 423 SMART serkin_6 13 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3465 423 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524
Tpr1g3465 423 ProSiteProfiles Protein kinase domain profile. 13 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3465 423 Pfam Protein kinase domain 13 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3465 423 Gene3D Phosphorylase Kinase; domain 1 4 92 - -
Tpr1g3465 423 PANTHER - 2 423 - -
Tpr1g3465 423 SUPERFAMILY Protein kinase-like (PK-like) 9 281 IPR011009 -
Tpr1g3465 423 ProSitePatterns Serine/Threonine protein kinases active-site signature. 131 143 IPR008271 GO:0004672|GO:0006468
Tpr1g3465 423 Gene3D Kinase associated domain 1, KA1 294 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3465 Tpr-Chr1 38917313 38919404 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3465 2 423 CBL-interacting serine-threonine protein kinases AT5G25110 67.890 0.0 622
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Tpr1g3465 Pkinase 6e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3465 - - tcc:18587713 634.409