Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3463 ATGGAATCAACATGCGTGGATACTTCTCTCAATCTTAACATTAATCATCCTTCTACTGCTACATACAAGGATGAAATTATGGTTGAAGAGTTACATCGTCTCAATTGTGAGAACAAGTGGCTAAGTGAAACATTGAGCAACATGTGTGAGAATTATGAAGCTATGCAAAAGCAATTGAATCAATTGATGAATCAAAATTGTGAAACCCAAACTCATGAAGAATCAAGGAAGAGAAAAGCTGAGAGTGAAAATTGCAATAATATGTTTGGTACTATTAATGTAATTAATAATGAGTGTAGCACTACTGATGAGGAATCATTAATCAAAAGGCCATGTAGGGAAATTTCATCACCTAAGGCTTATAAGGTTCTTGTGAAGACAGAAGCATCTAGTAATAGCTTATATGTGATGGATGGATATCAATGGAGGAAATATGGTCAGAAGGTTACTAGAGATAATCCCTCTCCTAGAGCTTACTTTAGGTGCTCCAATGCTCCAAGCTGCCCAGTTAAAAAGAAGGTGCAAAAAAGTTTAGAAGACCCTACTATACTAGTTGCAACATATGAAGGAGAGCACAACCATGGTCATGAGAAAGCTGAAATATCAATGATATCAAGCCAAATTGAAGAATCCTTTATAGGTTCAGTTCATGTTACTTCACCTAAACAAATTATTCAAAGGACTTCTCCATCCATGAAGATTGACAATGTTCCAAAATCATCTATCCAACAATTTTTGGTTCAACAAATGGCTACTTCTTTGACAAATGATCCTAATTTCACTGCAGCACTTGCTAGTGCAATTTCAGGAAGAATTTTGGACCATACTTCTAATAAAGCCAATTGGTGA 849 0.3557 MESTCVDTSLNLNINHPSTATYKDEIMVEELHRLNCENKWLSETLSNMCENYEAMQKQLNQLMNQNCETQTHEESRKRKAESENCNNMFGTINVINNECSTTDEESLIKRPCREISSPKAYKVLVKTEASSNSLYVMDGYQWRKYGQKVTRDNPSPRAYFRCSNAPSCPVKKKVQKSLEDPTILVATYEGEHNHGHEKAEISMISSQIEESFIGSVHVTSPKQIIQRTSPSMKIDNVPKSSIQQFLVQQMATSLTNDPNFTAALASAISGRILDHTSNKANW* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3463 282 Coils Coil 45 65 - -
Tpr1g3463 282 Gene3D WRKY domain 120 196 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr1g3463 282 ProSiteProfiles WRKY domain profile. 131 197 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr1g3463 282 SUPERFAMILY WRKY DNA-binding domain 133 196 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr1g3463 282 Pfam WRKY DNA -binding domain 138 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr1g3463 282 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 1 276 IPR044810 GO:0003700
Tpr1g3463 282 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 276 - -
Tpr1g3463 282 SMART WRKY_cls 136 196 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3463 Tpr-Chr1 38895133 38897566 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3463 3 272 WRKY Transcription Factor Family AT1G80840 44.218 2.89e-70 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tpr1g3463 WRKY 2.8e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3463 - - gmx:100810978 306.219
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3463 1 38895133 38897566 Tpr7g0697 7 6204572 6207010 PCT