Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3453 ATGGCTGTTTCATCTTCTTCATCTCTTTTGCTCCTTTTTCTTGTGTTTGGTTTTGCTGCAGCAACTAAGGATGTTTTGCTTGGTGGAAAGACCGATGCTTGGAAGATTCCATCTGAATCTGATTCACTCAACAAATGGGCTCAAAGTGTTCGCTTCCAAATTGGAGACCATCTAATTTGGAAATATGAAGCTGGAAAAGACTCAGTTTTGCAAGTTACCAAAGAGGATTATGTGAGTTGCAACATCTCAAACCCAATCAAACAATACAATGATGGAAACACAAAAGTTAGATTTGATCATTCTGGTCCATACTACTACATCAGTGGAGAAAAGGGTCACTGTGAAAAGGGTCAGAAACTTACTATAGTGGTTATGAGTCCAAGGGGAGGAAAGAGTCCTACTCCTGCTGCTTCCATTTCACCTGCAGTTGCACCTTCACCAGCTGAGGTTGCAGGTCCTGGTCCTGCTGTTGCTCCAGCTCCAACTAGTGCGGCAACTGTTTTGCAAGGTGGTGGTGTTTTTGTGGCTATTGGAGTTATTGTTGCTATGTGGCTTTTCTGA 561 0.4278 MAVSSSSSLLLLFLVFGFAAATKDVLLGGKTDAWKIPSESDSLNKWAQSVRFQIGDHLIWKYEAGKDSVLQVTKEDYVSCNISNPIKQYNDGNTKVRFDHSGPYYYISGEKGHCEKGQKLTIVVMSPRGGKSPTPAASISPAVAPSPAEVAGPGPAVAPAPTSAATVLQGGGVFVAIGVIVAMWLF* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3453 186 Pfam Plastocyanin-like domain 34 118 IPR003245 GO:0009055
Tpr1g3453 186 Gene3D - 14 135 IPR008972 -
Tpr1g3453 186 PANTHER EARLY NODULIN-LIKE PROTEIN 3 5 144 - -
Tpr1g3453 186 ProSiteProfiles Phytocyanin domain profile. 23 126 IPR003245 GO:0009055
Tpr1g3453 186 CDD OsENODL1_like 23 125 IPR041846 -
Tpr1g3453 186 SUPERFAMILY Cupredoxins 27 125 IPR008972 -
Tpr1g3453 186 PANTHER BLUE COPPER PROTEIN 5 144 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3453 Tpr-Chr1 38804225 38805696 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3453 14 183 Phytocyanin Superfamily AT2G25060 52.326 3.10e-56 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3453 - - gmx:100527857 206.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3453 1 38804225 38805696 Tpr1g3453 1 38804225 38805696 ECH