Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3419 ATGAAAACAGGGAAGCGAATTAATCACAACCCACAAAACTTGTCAGACACTTTTCCTGATATTTCTTCTGGGGCAATGTTTGGTACTAGTAGCGGTAGTAATATTGTATTTCATGATATTCAGAGCAACAATACTGCTTCTTGGCCAACATTTCCTGGTGGTGAGAAGGCAAGGGAGTCTTTTTCTTCTAGAGGGCAATTCTGTTTTACAAGCCCTGCATCTGGTCTAAATTTTTGCAGCTCAAATATGCAACCGACATCAAAAAAGGCTTTTGAACGGTTCTCAGCTAACTATGCATCTCCTTCCATGAATGGGTGTCCTCGTGTCTTCTGCATGGGAAAAAGTGGTCATCTTCTTATAAGCAATACATGGCTTCTTGGTATTGTTTGCTCATGTCATTGTTGCCACATGTCTATACTTAAGTTTTGTGAGCATTCAGGGTTACACAGTGTCAACCCAGGGGATGTTGTTCGAATGGAAAGCGGAGAGACCATTGCACAATGGCAGAAGCTGTATTTCTTAAAATTCGGGATTAGGTCTTCTGGAAATGAGAGTGAATGGGACTGGCCAGAAGTATTTTCAACAACAGGCAATCTGATGAAATCCAATGCATCTGCATCTGATATGTCCAAGAGTGATCTGTCACATATTTTGAATTCGGCTGCAGTCACGTTAAGAAAACAACCGATACCAAACCAGGATGGTTGCAACATTCCACTCAAGGGTTTAAACGCTTTTATGCAGAACAACCTGTATGACCGGGTGAAAAGCCAGTTAATGGAATCTAATATGGCTAATTCTACACCTGCACCAAACTTTGTCGGAGTTCAACTGAATGATGGTTGTCAGCCTATACCTCCTTTCCTTGATTCTCTGAAAAGGGATGAAAATTTGTCAATTACCCAGTCTACACAAATTCCAACAAGCCATAAAGACCATGCATGTATCAAAAAGAAGAATCTAAAGACTGGTATACTAGACAAAGATGCAACTTTCTCTGACATTGAGCTTAGGCTTGGTCAACCACATCGGGCCGGAAATCTAGTTGCATCATTTGTAGAATCACCATTGTTTACCTTTGCCAGTTCTCCTAAACCGCATTCCCTGAAGCAGATGACTAATAATCTTAGCAGGGAGGAGGAATTGCAGAATAATATTAGTCATGCTGCTGGTTCATTCAAAATGCTCGAGGAACAACCTCTACTTAACCCCCCATACTATATGTCTGGATGTAGTAATATTTCAGGTGCTGCTACATCTAGTTCACAAACTTACAATGTGGCCATGAGTTCATTGTTTTCACCATTTACACAATTTACTTCTCAACCCAAGGGTAATACAAATGCAAGCGGAAATTTGGTGAATGATGGTATCATGCCCAAGAACCCACATTCTGAATATGGTACCGTGCAATTTGGTTCTTCTAATGTTCTCTGGAATAGTAATGGTCACAAAGGTAGGCAATCAAATGATTCTGCACCAGAGTTCAATAAATATTTGGAAAATGTTAACGGGGCAAGGGTTGGTGAAGATTCCCGCACCAAAATAAATTCTGGATTTGAAGTAAATCAGTTCATGGAATTTGGCTCCATTAGAAGAACTGTTGGTGGTAGTGGTAGTTGTACTCCTGTTGTTAGCAAAAAGATATATGAATCAAGCTTTGCATCAGATACATCTGTGGGTGCAAATGCTTTGCAAGGTTCAAAAAATGTATTTTCTTTTGGACAAAGCAATCACTTGACTTTGGGGACAGCTGTTCCATTTGAAGAAAATTTGAAGAGCCTTCCCTATCTTGTTTCAAGCTCTACGTTAAATCAGAATTCTACACCGAAACAATGGGGTATTAATATGGATACTTACATGCTTGATGAAAATATGAGGTTGCTTGCATTGACACAAATGCTGGAGTTATCTAAGCAACAACAAGCTTTGTATTTTCATGATATGAATCAGAAGCTAGGGAAAACAGATATTCCAAAACCTCAGAACTATATATACAAGGCTTCAGTGCCTGAGCCGGGTTCTTCTGGGGCATCACTGAAATTACCCCAAAATAGGGGGACTTGTGGAAATCTTGAGATTACTGATGGTATACACAAACTAACTGGCTACGCTCACTGGCACACAATAATCTTTCTCTCCTCTTTTAACTGTTTTCTTAGTTTATTTCTTGGCATGTATTATGGATTTTCTTTTATAGTATGCATGTGTTTAAGGGTTATCTTTCTTGCAGGTTTGAACAGATATTGCGATGTCTCTGCCTTAACACCAATACCTTTACAATCTAAAGAAAAGGAATCACAATGTAAACATTCCTATAATCTTCAAAATGATGGTCCGTCTTTGAGCCTTGGAATGAACAATACCAGATCAAGTGAAAAATGCGCTGAGCAACAATCAGATATACATTTTGCAGGCAAATATGCTAGTGCTGCTTGGGAAAACTGTTGCAGAAACAATGTTTGCACTGGAATTGAACCCTCTCGCAATATTGTAAAAGAAAAGTTTGCCGATGTCAATGGTGTGACCTCTTTGAAAATAGTTTCAGAGTGTAGTAGAGATCAGAAACCTTCAAGGAATAAAAATATCTACTTTGAGCTAAGTGGATTAGATAGTCACGACACAGTAAAAATTGGCTCTCATACACCTCAATGGAGGGATGTGCCACGTAAGGTCAGTAAACCATTATGTGATGCAACAATTTTAGATCAGATGGCTACTATATTGGATTGTGAAGGACAAGACAGTGCCCAAATGGGAAACATTTCTACCAAACGTTTGAAAAATAAATTTGATAGGGAAGGTTTGTTGAAAGAGCGGGAAATTTTAAATGTTTCTTCTGGATGTTCTGCTCCTGTTGTTTCTCAGGCCTCTGGGATGGAGGTTAACAAGGTTGATTCTTGTAATGTAGATACTACATATGCTGGTTGTATTGAGAACCTTGTGCTTGATGAGGTGTTAGGAATTGATAAAGGCTGGTCCTCTGATTTGGTTGAAAGCGAAAGAAGTGCAGAGTATGCAGGTTCAACCAGTGGGAGTGACTTGAAAAAAGGTTATCCGAGAGTATTAAATGATCAACCATGCCGGAGTCTCCTTGACGATATTAAACTGTTAGATTCTTTGATTTGGAAAAAAGGGCAGGACCAAAATCATATAATGGTTAGTGCTAATTGTAGAGCTAGTCAATCTCAAAAAGTCAAAAAGGGCTTCAAAGGAAAAGAGCCAAAGAGAAACAAGGTGAGAGTTCTGGGTGCTTCATTGCTTCCTGGAATCTCTTGCTCATTGAATAACCAGATTGGAGAAAGTCCTGGATCTTTTGATCCCCCTTCTAGTTTATCTGAAGAAATGCAATTGTACTTTTCATCTAGCCAGCAAAGATCATATAACAAGGTTTCTATTGTTCAACCTATAACTAGTCACAGACCCTCTTCATTTTCATCTAAATTTCTCTCTTGTAATAATAATAATCTAAACAAACATCACAGAGATGAAGATTGCTGTGAGTCAGAATCAAATTCTCATACTGAGTTTCACACATTACCTGGAATTTCTAGAATAAAGAAATCAAGGAAGGTTTTCACTTCTGATTGCTTTGGGCATTTCCAAATGCAAGTACCACACTATGATGAACCAAAAAATGCTACGCAGATGTTATCCTCTAGCAGAAAAGGAAGCGCTCATAGAATTAAAAGGCCAGTAGTGTGTGGAAAATATGGGGAAATATCTAGTGAATTATCAATTACAGAAGTACCAAAACCAGCAAAAATTGTCTCTCTTAGCAAGGTTCTTAGAACTTCCAAAAGATGCATGATCCCTACAACTGAAACACCTAGTCTAACAGCAAAAAAGAAACAGAGGACATTGGGCTTTGAAACAAGTTGGGGGCATAGCTGTGCGAAATCTGGTTTAAAAGCTAAGAAAGATAATGAATCCGAATATACAATAATTTGTGATGAAACAAATTCCGATGTGTCTATGGAAGATTTTGAAAGAGGCTGCAAGCAAACTGTTGTTTACAAAGGGAAGAGAGATGCCAAAGAGAGGCAGGGTGATATTTTAAGCAGAGCTGATTCTCCATTGAAGGTGAAGAGCAGAGAAATTCGGAAACAGCGCAGCATTAACGAAATCATTACTAAAGAAACCCAAATGCAGGATATGTTGAAGTATGCGGAAGATCACGAGCATAGTTTGTGTAACAAAAGAAGTAACATCTCTGTTCAGGAACACAGAAACCTGTCCATCACCAATTCAGATTCTTTCTGCGGTGTCTGTCAAAGGTCAAGCAATGATGAAGTTAACAGTTTATTGAAGTGTAGTAAATGTCTAATTAAAGTTCGTCAGGCTGGCTATGGTATTTCAGCATTACCTAAAAGAGGTCTAAGGGGTTGTAGACCATGCCAAACAAACTCAAAAGATATTGTGTGTTCAATTTGCAATCAACGGGGTGGTTCGTGTATAGAGTGCAGGAATGTTGATTGCTCTGTCAAGTTTCATCCTTGTTCTCATCAGAAGAACCCTTTGCAAATCGAAACTGAGGGAATTAATGAAGAGAAAGTTTCATTTTATCGAAGATCTGTGCTTCATGGTATTGGCCCTGAATTTCAGTCTACGTATGATCCTACTGATGAGATGGATAGTCGAGAGGAAAAGGAATTTACCTGTGCTAGGACAGAGGGTTACAAGGGCCGTAAATGGGACGGTATCCAGAATAATCATACCAGTGCCTTAAAACTCAAGGGCGAATGCCGTGTTCCGGATGAGCAGTTAAATGCTTGGATTCACATAAATGGGAAGGAATTGAGCTCAAAAGGAATTTTGAAATTTCCAGATTCAGATATTGAGCATGATTCTCGGAAAACATGTTCTCTGCACAAACAAGTGAAGGGTCTTTTTGTATACAAATCTGGGATACATGGCCTTGGTCTTTATACTTCTCAATTAATATCTCAGGGTAGAATGGTTGTAGAGTATGTAGGTGAAATTGTGAGACAAAGTGTGGCTGATAAAAGAGAAATTGAATACATATCTGGAAGGAAACTTCAGTACAAAAGTGCCTGCTACTTATTTAGGATAGACAATGAACATGTAATTGATGCCACAAGGAAGGGGGGGATAGCTCGATTTGTTAACCACTCATGTCTGCCAAATTGCGTGTCAAAAGTCATTACTGTCAGGCATCTGAAGAAGGTTGTCTTCTTTGCGAAGAGGGACATACTTCCTGGTGAAGAGATTACTTACGATTACAAATTTAACTATGAAGATGAAGGAAAGAAAATTCCATGTTCCTGCAATTCAAAAACTTGCAGGCGCTCTCTGAACTGA 5322 0.3893 MKTGKRINHNPQNLSDTFPDISSGAMFGTSSGSNIVFHDIQSNNTASWPTFPGGEKARESFSSRGQFCFTSPASGLNFCSSNMQPTSKKAFERFSANYASPSMNGCPRVFCMGKSGHLLISNTWLLGIVCSCHCCHMSILKFCEHSGLHSVNPGDVVRMESGETIAQWQKLYFLKFGIRSSGNESEWDWPEVFSTTGNLMKSNASASDMSKSDLSHILNSAAVTLRKQPIPNQDGCNIPLKGLNAFMQNNLYDRVKSQLMESNMANSTPAPNFVGVQLNDGCQPIPPFLDSLKRDENLSITQSTQIPTSHKDHACIKKKNLKTGILDKDATFSDIELRLGQPHRAGNLVASFVESPLFTFASSPKPHSLKQMTNNLSREEELQNNISHAAGSFKMLEEQPLLNPPYYMSGCSNISGAATSSSQTYNVAMSSLFSPFTQFTSQPKGNTNASGNLVNDGIMPKNPHSEYGTVQFGSSNVLWNSNGHKGRQSNDSAPEFNKYLENVNGARVGEDSRTKINSGFEVNQFMEFGSIRRTVGGSGSCTPVVSKKIYESSFASDTSVGANALQGSKNVFSFGQSNHLTLGTAVPFEENLKSLPYLVSSSTLNQNSTPKQWGINMDTYMLDENMRLLALTQMLELSKQQQALYFHDMNQKLGKTDIPKPQNYIYKASVPEPGSSGASLKLPQNRGTCGNLEITDGIHKLTGYAHWHTIIFLSSFNCFLSLFLGMYYGFSFIVCMCLRVIFLAGLNRYCDVSALTPIPLQSKEKESQCKHSYNLQNDGPSLSLGMNNTRSSEKCAEQQSDIHFAGKYASAAWENCCRNNVCTGIEPSRNIVKEKFADVNGVTSLKIVSECSRDQKPSRNKNIYFELSGLDSHDTVKIGSHTPQWRDVPRKVSKPLCDATILDQMATILDCEGQDSAQMGNISTKRLKNKFDREGLLKEREILNVSSGCSAPVVSQASGMEVNKVDSCNVDTTYAGCIENLVLDEVLGIDKGWSSDLVESERSAEYAGSTSGSDLKKGYPRVLNDQPCRSLLDDIKLLDSLIWKKGQDQNHIMVSANCRASQSQKVKKGFKGKEPKRNKVRVLGASLLPGISCSLNNQIGESPGSFDPPSSLSEEMQLYFSSSQQRSYNKVSIVQPITSHRPSSFSSKFLSCNNNNLNKHHRDEDCCESESNSHTEFHTLPGISRIKKSRKVFTSDCFGHFQMQVPHYDEPKNATQMLSSSRKGSAHRIKRPVVCGKYGEISSELSITEVPKPAKIVSLSKVLRTSKRCMIPTTETPSLTAKKKQRTLGFETSWGHSCAKSGLKAKKDNESEYTIICDETNSDVSMEDFERGCKQTVVYKGKRDAKERQGDILSRADSPLKVKSREIRKQRSINEIITKETQMQDMLKYAEDHEHSLCNKRSNISVQEHRNLSITNSDSFCGVCQRSSNDEVNSLLKCSKCLIKVRQAGYGISALPKRGLRGCRPCQTNSKDIVCSICNQRGGSCIECRNVDCSVKFHPCSHQKNPLQIETEGINEEKVSFYRRSVLHGIGPEFQSTYDPTDEMDSREEKEFTCARTEGYKGRKWDGIQNNHTSALKLKGECRVPDEQLNAWIHINGKELSSKGILKFPDSDIEHDSRKTCSLHKQVKGLFVYKSGIHGLGLYTSQLISQGRMVVEYVGEIVRQSVADKREIEYISGRKLQYKSACYLFRIDNEHVIDATRKGGIARFVNHSCLPNCVSKVITVRHLKKVVFFAKRDILPGEEITYDYKFNYEDEGKKIPCSCNSKTCRRSLN* 1774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3419 1773 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE TRITHORAX 1470 1773 - -
Tpr1g3419 1773 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE TRITHORAX 3 1475 - -
Tpr1g3419 1773 PANTHER HISTONE-LYSINE-N-METHYLTRANSFERASE 2 KMT2 FAMILY MEMBER 1470 1773 - -
Tpr1g3419 1773 PANTHER HISTONE-LYSINE-N-METHYLTRANSFERASE 2 KMT2 FAMILY MEMBER 3 1475 - -
Tpr1g3419 1773 CDD SET_SETD1-like 1630 1769 - -
Tpr1g3419 1773 Pfam Tify domain binding domain 124 171 IPR032308 -
Tpr1g3419 1773 SMART set_7 1628 1755 IPR001214 GO:0005515
Tpr1g3419 1773 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1405 1472 IPR013083 -
Tpr1g3419 1773 SUPERFAMILY SET domain 1620 1769 IPR046341 -
Tpr1g3419 1773 ProSiteProfiles SET domain profile. 1628 1749 IPR001214 GO:0005515
Tpr1g3419 1773 ProSiteProfiles Post-SET domain profile. 1757 1773 IPR003616 -
Tpr1g3419 1773 Gene3D SET domain 1536 1773 IPR046341 -
Tpr1g3419 1773 Pfam SET domain 1639 1748 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3419 Tpr-Chr1 38494906 38508435 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3419 1630 1769 C2H2 Transcription Factor Family AT2G23740 33.333 2.87e-16 83.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Tpr1g3419 SET 1.4e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3419 - - cam:101492875 1927.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3419 1 38494906 38508435 Tpr1g3419 1 38494906 38508435 ECH